- Transcript 'Cisavi.CG.ENS81.R14....' >
- Transcript 'KH2012:KH.S612.3.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S9...' >
- Clone 'csef026l09' >
- Transcript 'Moocul.CG.ELv1_2.S49...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S49270.g02745.01.t
Possible name(s)
HOXA4; HOXB4; HOXC4
Gene model
Location
S49270 [15,512 / 19,669]
Amino acid sequence
Length: 469
>Moocul.CG.ELv1_2.S49270.g02745.01.p
MIKMSSAKVNPMDSQPSLYDVTMLPQFQISPPGPIPYSDSNGIHGNQDHMTYDRRDDGVL
NGGGFYGDKIKGDIDGKFKGSSSDENSAEPKVYPWMKRMHMNQQSGSVVAEQGEPGKRPR
TAYTRHQVLELEKEFHYNRYLTRRRRIEIAHSLCLTERQVKIWFQNRRMKWKKDHKLPNT
KSSHQNKKNRQRTATVHHEPTEDFFNSIPGSSSFQPIPDIHISGYHHAMAQFPIEDPVLQ
RGASFDHVDTLQYSVNQTDSFLHPFMDAPVRDMHTLTPPNSNEEMSFKPYPLGDAHGIRN
AVSLDYHDYPPPVSSYAKTTPILRPSNSFNVESTSEMAPLSRDYHMQNGDYSPNGNLDTL
AVPNDTFYQRGTRPPFLQSLSCPETSMPPYSGSNNIVTQQSVTSPQHAEYNNQTFLNLSP
STSMGNTHHTSPSAPSYEPGNASNNSNKDMFPYEVKPSVPTSAFTKAVC
Nucleotide sequence
Length: 1,452
>Moocul.CG.ELv1_2.S49270.g02745.01.t
TGAAGCTCAACCAATCGAGAAAAATTAAAGAAATTGAAATCAATGATTAAGATGTCCAGC
GCAAAAGTAAATCCAATGGATAGCCAGCCAAGTCTATATGACGTAACAATGCTACCACAA
TTTCAAATCAGCCCTCCAGGACCGATACCATATTCCGACTCTAATGGTATCCATGGTAAC
CAAGATCACATGACTTACGATCGACGGGACGACGGAGTGTTGAATGGGGGTGGTTTCTAT
GGCGACAAGATTAAGGGTGATATCGACGGAAAGTTCAAAGGGTCATCTTCCGATGAGAAT
TCTGCCGAACCGAAAGTTTATCCGTGGATGAAACGAATGCATATGAACCAACAATCTGGC
AGCGTGGTTGCGGAACAAGGGGAACCTGGGAAACGTCCAAGAACAGCTTACACACGACAC
CAAGTGTTAGAGTTGGAAAAAGAGTTCCACTACAATCGATATCTGACCAGAAGACGTAGA
ATTGAAATCGCTCATTCGTTGTGCTTGACTGAACGACAGGTAAAAATTTGGTTTCAAAAT
CGTCGAATGAAGTGGAAAAAAGACCACAAACTCCCAAACACCAAATCAAGTCACCAGAAC
AAGAAAAACCGCCAAAGAACCGCCACCGTCCACCACGAACCGACTGAAGACTTTTTCAAC
AGCATTCCAGGGTCAAGTTCATTTCAACCAATTCCTGATATTCATATCTCTGGCTACCAT
CATGCCATGGCACAGTTTCCAATTGAAGATCCCGTGCTGCAAAGAGGGGCATCGTTTGAT
CACGTGGATACGTTGCAGTATTCAGTAAATCAAACTGATTCGTTCTTACATCCATTTATG
GATGCTCCAGTGCGAGATATGCATACGTTAACCCCACCGAATTCGAATGAAGAAATGTCG
TTTAAACCGTATCCGCTAGGAGATGCTCATGGGATTCGTAATGCTGTTTCGTTAGATTAT
CACGACTACCCACCACCAGTTTCAAGTTATGCCAAAACTACCCCAATACTTCGACCAAGC
AATTCATTTAACGTGGAATCCACTAGCGAGATGGCTCCTTTGAGTAGAGATTATCATATG
CAAAATGGTGATTACTCACCAAATGGAAATTTGGACACGTTAGCTGTGCCGAATGATACT
TTTTACCAGCGTGGTACACGCCCACCATTCCTCCAATCATTATCATGTCCTGAAACCTCA
ATGCCGCCATATAGCGGATCAAATAATATCGTCACCCAACAGAGTGTTACTTCTCCTCAA
CATGCCGAATACAACAATCAAACTTTTCTCAATCTTTCACCATCTACATCAATGGGAAAC
ACACACCACACGAGCCCAAGTGCGCCATCTTATGAACCAGGAAACGCAAGTAATAATTCG
AATAAAGATATGTTTCCATATGAAGTAAAACCGTCGGTGCCAACATCCGCATTCACAAAA
GCTGTTTGTTAA
| PRINTS |
Homeobox_antennapedia (IPR017995) - T[91-98] 2.8E-5 - T[117-132] 2.8E-5 |
| ProSitePatterns |
Homeobox_Antennapedia_CS (IPR001827) - T[92-97] . |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[96-174] 1.67E-26 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[114-174] 21.929 |
| SMART |
Homeobox_dom (IPR001356) - T[116-178] 8.5E-28 |
| Pfam |
Homeobox_dom (IPR001356) - T[117-173] 1.0E-22 |
| CDD |
Homeobox_dom (IPR001356) - T[117-175] 3.80881E-27 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[138-149] 1.5E-8 - T[153-163] 1.5E-8 - T[163-172] 1.5E-8 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[149-172] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXA4_HUMAN | 78.495 % | 154 | 4.51E-43 |
| HXC4_HUMAN | 73.737 % | 153 | 3.41E-43 |
| HXB4_HUMAN | 71.287 % | 152 | 5.08E-43 |