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- Transcript 'Moocul.CG.ELv1_2.S48...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S48789.g02703.01.t
Possible name(s)
DMC1; RAD51; RAD51B
Gene model
Location
S48789 [13,181 / 19,501]
Amino acid sequence
Length: 339
>Moocul.CG.ELv1_2.S48789.g02703.01.p
MAQAVQEQAAIQLEEDEESIGPLPINKLEQSGISASDVKKLEEHGYHSVEAVAYAPKKEL
VSVRGISEAKADKISIEAAKLVPMGFTTATEFHQRRSEIIQISTGSKELDKLLQGGIETG
SITEMFGEFRTGKSQICHTIAVTCQLPVDQGGGEGKCMYIDTEGTFRPERLLAVADKYGL
SGQDVLDNVAYARAYNTDHQTQLLVQAAAMMSETRYAMLIIDSATALYRTDYSGRGELSA
RQMHLGKFLRMLLRLADEFGVAVVITNQVVAQVDGGAMFCADPKKPIGGNIIAHASTTRL
YLRKGRGETRICKIYDSPCLPESEAVFAITAEGISDPKD
Nucleotide sequence
Length: 1,501
>Moocul.CG.ELv1_2.S48789.g02703.01.t
CCTGTCTGCCTTTCGTGTATTTACAGAAAAAGCAGGCGGCGGGAGAAACAAACTTTACTT
TGCGTCAGGTTTTCCATTGTGCTGGGTTTTCCTGTTTCATTTTTTTGTTCTGTGTTGCAA
GTATACCGACTGACAGACCTGCCGACGTACCGTAATTAATTGATACGATATAGGCCTAAT
ATGGCGCAAGCAGTACAAGAGCAGGCAGCTATACAATTGGAAGAGGATGAAGAATCTATA
GGACCACTACCTATAAATAAATTGGAGCAAAGTGGAATAAGCGCAAGTGATGTGAAGAAG
TTGGAGGAACATGGCTATCATTCTGTGGAAGCCGTTGCATATGCACCAAAGAAAGAGTTG
GTGTCTGTAAGAGGAATCAGTGAAGCAAAAGCGGATAAAATATCTATCGAAGCTGCTAAA
CTTGTACCAATGGGTTTCACAACTGCAACGGAATTTCATCAACGTCGTTCGGAGATCATT
CAAATCTCAACAGGATCTAAAGAACTTGATAAATTATTGCAGGGTGGAATTGAAACAGGA
TCCATCACTGAAATGTTTGGTGAATTCAGGACTGGCAAAAGTCAGATATGTCACACGATT
GCTGTGACTTGTCAGCTTCCAGTGGACCAAGGTGGTGGAGAGGGAAAATGTATGTACATT
GACACTGAGGGAACATTCCGACCGGAAAGACTGCTCGCTGTGGCAGATAAATATGGTTTA
TCTGGTCAAGATGTCCTGGACAACGTGGCATATGCCAGGGCATACAATACTGACCACCAA
ACACAATTATTAGTTCAAGCTGCTGCCATGATGTCGGAAACAAGGTATGCAATGTTAATC
ATCGACAGCGCAACAGCACTGTATCGGACAGATTACAGTGGACGTGGTGAACTCTCTGCC
CGACAAATGCATCTTGGAAAGTTTCTGCGGATGTTGTTACGACTTGCAGATGAGTTTGGA
GTGGCAGTAGTAATCACAAACCAAGTTGTTGCACAAGTGGATGGGGGAGCCATGTTCTGC
GCAGATCCTAAAAAGCCGATTGGTGGAAATATAATCGCTCATGCATCAACAACAAGACTG
TATTTACGTAAAGGTAGAGGAGAAACAAGAATATGCAAGATTTATGATTCACCGTGTCTT
CCTGAATCCGAAGCTGTATTCGCAATTACAGCTGAAGGCATCAGTGACCCGAAAGATTAA
CTTAAACAGTCAAGCAATGTCAGGAAAATATCTGATTGATATTTAAAAGATTGACATACA
CAAATGATTGGCCAGGCCAGGATTGTTGTTGAAGAGTTTCACGTTTACATAATTCACATT
AAAATTTAGAGGCTCAAGAGACTTTTTTTTATTTTAATACATTTTGTATGCAGCGTCAAT
AAAATATATAATTTGTAAATACAATTGCTTTATATCACTGCCCCTTGATACTTCTATGAC
TTATGTATATTTCTGTTATTGTTCTTTTGATGAATAAATGGTTTTGTTGCTTCTTGTACA
A
| PIRSF |
DNA_recomb/repair_RecA-like (IPR016467) - T[11-339] 9.4E-141 |
| SUPERFAMILY |
DNA_repair_Rad51/TF_NusA_a-hlx (IPR010995) - T[17-85] 1.73E-15 |
| TIGRFAM |
DNA_recomb/repair_Rad51 (IPR011941) - T[25-339] 3.5E-182 |
| Pfam |
DNA_recomb/repair_Rad51_C (IPR013632) - T[84-336] 4.4E-130 |
| ProSiteProfiles |
RecA_ATP-bd (IPR020588) - T[98-269] 49.826 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[101-336] 4.23E-62 |
| CDD |
Rad51_DMC1_RadA (IPR033925) - T[102-335] 1.20289E-147 |
| SMART |
AAA+_ATPase (IPR003593) - T[119-306] 9.4E-8 |
| ProSiteProfiles |
RecA_monomer-monomer_interface (IPR020587) - T[276-339] 21.477 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DMC1_HUMAN | 51.032 % | 335 | 1.58E-114 |
| RAD51_HUMAN | 83.776 % | 600 | 0 |
| RA51B_HUMAN | 26.844 % | 111 | 1.03E-27 |