- Transcript 'KH2012:KH.L132.17.v1...' >
- Transcript 'Moocul.CG.ELv1_2.S47...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S47570.g02617.01.t
Possible name(s)
BMP3; GDF6; NODAL
Gene model
Location
S47570 [22,848 / 24,836]
Amino acid sequence
Length: 425
>Moocul.CG.ELv1_2.S47570.g02617.01.p
MNCMKIITLVAMLTATAEGNLPSFARKMMEFQQKVMEEIQPNLQKVTPQHTAPNHMLNLY
REKEGLEQRELGRGRSTRGGMHSFTRKQSLALKKSNFVKSFTAIESEVIDNKLVATFDLS
AMKDHEKIRLAEIRIEHLNGKEVNKIEIRNQDQELGDMKVAKSEMVINITPIIKRWYKNE
NRETGKVITSVKDNQNTEVTLTIYSNNKHYNLIKTVEERQERSRRSASNRMRKRNRNGKG
KRGRNNKTSEGRHTQEEEEMKMNSIGMGNELEESELDAHHVNGEGSNQEDDWINQQMKRK
NEEDENRPQPKRVEYSQRAKPTHCRRVAFQVDFDKIGWGSWIIFPKRYNAYRCEGSCRLP
LHDSVNPTNHAFVQSMMAASNPHANIPGPCCVPTKLNPISILYYENGEVKQRTHEDMIVE
ECGCR
Nucleotide sequence
Length: 1,468
>Moocul.CG.ELv1_2.S47570.g02617.01.t
TTAATATATATAATAATAAACATAAATATGAACTGCATGAAGATAATAACATTGGTGGCG
ATGTTGACTGCAACCGCGGAAGGAAATTTACCATCTTTTGCAAGAAAAATGATGGAATTT
CAACAGAAAGTAATGGAAGAAATTCAACCAAACTTGCAAAAAGTTACACCGCAACACACC
GCTCCAAATCACATGTTGAATTTGTACCGTGAAAAGGAAGGTTTGGAACAGCGGGAACTT
GGACGAGGCAGAAGCACACGTGGTGGGATGCATTCATTCACACGCAAACAATCACTTGCT
TTGAAAAAATCAAACTTCGTCAAAAGTTTTACGGCAATAGAATCGGAAGTTATCGACAAT
AAACTCGTTGCGACCTTTGACCTTTCGGCGATGAAAGATCACGAAAAAATTCGATTGGCT
GAAATCAGAATTGAACATTTGAATGGAAAGGAAGTCAATAAAATTGAAATCCGAAATCAA
GATCAAGAACTCGGCGACATGAAAGTAGCGAAAAGTGAAATGGTTATCAACATTACTCCA
ATCATCAAACGATGGTACAAGAATGAGAACAGAGAAACTGGTAAAGTTATCACAAGTGTG
AAAGACAATCAAAACACTGAAGTCACTCTAACGATTTACTCCAACAACAAACATTACAAC
CTGATCAAAACAGTTGAAGAGCGACAAGAAAGATCAAGACGATCCGCTTCCAACAGAATG
CGAAAACGAAACAGAAATGGCAAAGGAAAACGAGGAAGAAATAATAAAACATCCGAAGGA
AGACATACTCAAGAAGAAGAAGAAATGAAAATGAATTCTATTGGTATGGGAAATGAATTA
GAAGAATCAGAGTTGGATGCTCATCACGTGAATGGCGAAGGAAGCAACCAAGAAGATGAC
TGGATCAACCAACAGATGAAACGCAAAAATGAAGAAGATGAAAACAGACCTCAACCAAAA
CGAGTTGAATATTCCCAAAGAGCAAAACCAACTCATTGCAGACGTGTTGCATTTCAAGTT
GACTTCGATAAGATTGGATGGGGTTCGTGGATCATTTTCCCAAAGCGATACAACGCATAC
AGATGTGAAGGTTCCTGTCGACTTCCATTACACGACAGCGTCAACCCAACAAACCACGCT
TTCGTCCAAAGTATGATGGCAGCTTCCAATCCACACGCTAACATTCCTGGCCCATGTTGT
GTGCCAACCAAACTGAATCCCATCAGTATTTTGTATTATGAAAACGGTGAAGTGAAGCAA
CGTACTCATGAGGATATGATCGTTGAAGAATGTGGATGCAGATAATTAAACCATTAAAAC
CAAACCTCATGCGCTTATACCTTCACTTCACTGTATGCTCCATATTTATATTTTTATACT
TTTTGTTCATTTAGTTTTGCATGTTTCTATTTATTTTACAAGGCATCAAATGCCTTATTT
CCAGTTTCACAAATAAACACAATCATGA
| PANTHER |
TGF-beta-rel (IPR015615) - T[20-425] 5.0E-81 |
| Pfam |
TGF-b_propeptide (IPR001111) - T[41-192] 1.6E-6 |
| ProSiteProfiles |
TGF-b_C (IPR001839) - T[309-425] 38.494 |
| Gene3D |
Cystine-knot_cytokine (IPR029034) - T[309-425] 1.2E-37 |
| SUPERFAMILY |
Cystine-knot_cytokine (IPR029034) - T[317-425] 4.21E-37 |
| Pfam |
TGF-b_C (IPR001839) - T[323-424] 2.4E-31 |
| SMART |
TGF-b_C (IPR001839) - T[324-425] 1.3E-56 |
| ProSitePatterns |
TGFb_CS (IPR017948) - T[342-357] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| BMP3_HUMAN | 27.54 % | 125 | 7.89E-32 |
| NODAL_HUMAN | 58.416 % | 143 | 4.18E-39 |
| GDF6_HUMAN | 49.515 % | 118 | 3.77E-29 |