Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S4192.g00105.01.t

Possible name(s)

CCNB1; CCNB2; CCNB3

Gene model

Moocul.CG.ELv1_2.S4192.g00105

Location

S4192 [24,585 / 25,893]

Sequences

Amino acid sequence

Length: 435

>Moocul.CG.ELv1_2.S4192.g00105.01.p
MPLTLRNKNTVDLRNGNNRKKSSKDQNKEDENLSNKKRMATSPAKGEVVKRSAFGDITNS
IMIPGNDDKLRKPLKKLKTIKQAEISMPENKTFNTLGTKSNSVRVTRRSQSLSQINPNRI
KIHEDPVGLADDLPTKFYEHEASPERKALNYKDIDKENISNPNETPTYGFVIFEYMRARE
RQFPLTKYLSTQHEITPDMRAILIDWMVEVQENFELNHETLYLAVKLTDHYLSRTQSSRE
SLQLIGAAALLIAAKFDERHPPYVDDFLYICDDAYNRKEMLAMERIVLQKIGFDINIPIS
YRYLRRYAKCSKTNMETLTLARFALELSLQHYDFIAESDSIMAAGALWLAFKMKSTGGWT
DTLVYYSSHKELVVATMAIRLNRMIELSKGKKLQTVWMKYTHSIFYEVAKTPTLSESKIE
EELNRIKKENGEQET

Nucleotide sequence

Length: 1,308

>Moocul.CG.ELv1_2.S4192.g00105.01.t
ATGCCTCTTACTTTGAGAAATAAAAATACTGTTGATTTAAGAAATGGAAACAACCGCAAA
AAATCCTCCAAAGACCAAAACAAAGAGGACGAAAACCTAAGCAATAAAAAGAGGATGGCA
ACGTCACCGGCTAAAGGAGAAGTTGTGAAACGTTCAGCTTTTGGAGACATCACAAATTCA
ATTATGATCCCAGGCAATGATGACAAATTAAGAAAACCACTAAAAAAACTAAAAACTATC
AAGCAAGCGGAAATATCTATGCCAGAAAATAAGACGTTTAACACACTCGGTACAAAGAGC
AATTCTGTTCGAGTTACCAGACGAAGTCAATCGCTGTCTCAAATCAATCCAAACAGAATA
AAAATTCATGAAGATCCGGTAGGCCTAGCTGATGATTTGCCAACAAAGTTTTATGAACAT
GAAGCTTCTCCTGAAAGAAAAGCGCTCAATTACAAAGATATTGATAAAGAAAACATCTCT
AATCCGAATGAAACACCAACCTATGGATTTGTGATTTTTGAATATATGAGAGCAAGAGAA
CGACAGTTTCCTTTAACAAAATATCTGTCAACACAACACGAAATCACACCTGATATGAGA
GCTATTCTTATCGATTGGATGGTCGAAGTGCAAGAGAATTTCGAACTCAATCACGAAACA
TTGTACCTTGCTGTAAAACTGACTGATCATTATCTATCCCGCACTCAGTCCTCAAGAGAG
TCATTGCAACTTATTGGAGCTGCTGCACTTCTAATTGCTGCAAAATTTGACGAACGACAT
CCACCTTATGTTGACGACTTTCTCTATATTTGTGACGATGCTTACAACAGAAAAGAAATG
TTGGCCATGGAAAGAATCGTATTACAGAAAATTGGATTTGACATTAATATTCCAATATCA
TATCGCTACCTCAGAAGATACGCAAAATGCTCAAAAACCAACATGGAAACGCTTACACTT
GCACGATTTGCGCTTGAGTTGAGTTTGCAACACTACGATTTTATTGCTGAAAGTGATTCC
ATAATGGCAGCCGGAGCTTTATGGCTTGCATTTAAGATGAAGTCCACAGGTGGTTGGACG
GACACACTTGTGTATTATTCCTCCCATAAAGAACTTGTGGTAGCAACCATGGCCATTCGA
TTAAACCGAATGATCGAATTGTCCAAAGGAAAGAAACTTCAAACGGTGTGGATGAAGTAC
ACACACAGCATATTTTACGAGGTGGCAAAGACACCAACATTATCGGAAAGCAAGATTGAA
GAAGAACTGAACCGAATCAAAAAAGAGAACGGAGAGCAAGAGACTTAG

InterProScan

PANTHER	Cyclin_B3 (IPR015452) - T[29-424] 2.1E-130
SUPERFAMILY	Cyclin-like_sf (IPR036915) - T[160-296] 7.29E-44 - T[297-414] 3.58E-26
Pfam	Cyclin_N (IPR006671) - T[172-296] 6.9E-40
CDD	Cyclin-like (IPR013763) - T[199-288] 2.28933E-8 - T[296-373] 6.86371E-12
SMART	Cyclin-like (IPR013763) - T[205-289] 1.2E-23 - T[302-383] 1.6E-9
Pfam	Cyclin_C-dom (IPR004367) - T[298-412] 1.6E-20
SMART	Cyclin_C-dom (IPR004367) - T[298-414] 1.4E-24

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CCNB3_HUMAN	50.735 %	270	1.92E-80
CCNB1_HUMAN	28.899 %	175	3.16E-50
CCNB2_HUMAN	31.985 %	158	3.01E-44