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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C1.1001.v1...' > 
  2. Transcript 'Boleac.CG.SB_v3.S171...' > 
  3. Region 'REG00000860' > 
  4. Region 'REG00000811' > 
  5. Transcript 'Moocul.CG.ELv1_2.S41...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S4192.g00103.01.t

Possible name(s)

Moocul.CG.ELv1_2.S4192.g00103

Gene model

Moocul.CG.ELv1_2.S4192.g00103

Location

S4192 [15,151 / 17,116]

Sequences

Amino acid sequence

Length: 331

>Moocul.CG.ELv1_2.S4192.g00103.01.p
MSESSSYMRMSESSTPGIKNEVALSKGSLSDFSDSVASSFVDSGFGDKRKATIPKSGFRP
ITETRLIDNGIADGNQVRCNGLPPLYSGKEEECCNEARNDKQTFYFKNSMTHKVQIRKLA
MVVVVCLFATSICLVIVTWINMMNHTHDDQHAHIQPTPRSLVGSNDGVSADNYKVVGHFK
LNMTSAPTENVDGRIYLRWQDDFNSSQKTNLVYTEQTNVGITIMKTANFFVYSQVSLYGK
NDAVNGTAPLMYVKLWKKLANSAKKDHVELLVKCPVSLYEDGVGTNVYRSVLGLTVSSVH
RGDDLMVSLSSEIPDGMNWQQKSTYIGLFEI

Nucleotide sequence

Length: 1,369

>Moocul.CG.ELv1_2.S4192.g00103.01.t
AGAAAGCATATCCTTCTTTGTGTTAACCACTCAACAGCATGTCTGAATCATCATCTTACA
TGCGAATGTCTGAATCATCAACACCAGGAATAAAAAATGAAGTTGCTTTAAGCAAAGGTT
CATTAAGCGATTTTTCCGACAGTGTAGCATCGTCGTTCGTAGACAGTGGATTTGGTGACA
AGAGAAAAGCCACCATTCCAAAGAGTGGCTTTCGACCAATAACAGAGACAAGACTGATTG
ACAATGGCATTGCTGATGGCAATCAAGTTCGTTGCAATGGACTTCCACCACTGTACAGTG
GAAAGGAAGAAGAGTGTTGCAATGAAGCACGAAATGACAAACAGACTTTCTATTTCAAGA
ATAGCATGACGCATAAAGTTCAAATCCGAAAGCTTGCAATGGTGGTAGTTGTGTGTTTGT
TTGCAACATCTATATGCCTCGTTATTGTTACATGGATTAACATGATGAATCACACACACG
ATGATCAGCATGCCCATATTCAGCCCACACCAAGATCTTTGGTTGGATCCAATGATGGCG
TGTCGGCGGACAATTATAAGGTTGTAGGACATTTCAAATTGAATATGACATCTGCTCCAA
CAGAGAATGTTGATGGAAGAATTTACTTAAGATGGCAAGATGACTTCAACAGTTCACAGA
AAACCAATCTCGTTTACACTGAGCAAACTAATGTTGGAATCACAATAATGAAAACGGCAA
ATTTTTTTGTGTATTCACAGGTGTCGCTGTACGGGAAGAACGATGCAGTGAATGGCACGG
CGCCACTTATGTACGTGAAACTGTGGAAAAAACTAGCAAACTCTGCTAAGAAAGACCACG
TTGAACTTCTTGTAAAATGTCCAGTAAGCCTTTACGAAGATGGCGTGGGCACAAATGTCT
ACAGATCTGTCCTGGGACTAACTGTGTCGTCCGTTCACAGGGGTGATGATTTGATGGTTA
GTTTATCCTCGGAAATTCCGGACGGGATGAACTGGCAACAAAAATCAACTTACATTGGGT
TGTTTGAGATATGAAACAGTAACACACAACCACGTGTAAATAATGCACTGCCAAACCTCG
TGCGTGGTTGCTATGGGTTGGCTGGAGGCCCGTCAATGCAATTGAAATGTAGTTAATTCC
ACGTATGCAATCGATGTAAATGCTAAATGGTTTTCGAGAACACTTTTTATGGTTTTTACT
TTTTAATACAGCATGCCCTCCTTGGTTTTAGCCTCACATCTTGATTACGTCCTTTGGCAT
AAGCACTCCTTTGTTTTGAAGCATCAATGTGATATTTTGTTAAGTGATTTTTTATTTGAA
AGATATTTTTATTTTGCAATTTTCATTTTGTAACATATACTACCACTGA

InterProScan

Gene3D
Tumour_necrosis_fac-like_dom (IPR008983) - T[174-331] 4.3E-10
SUPERFAMILY
Tumour_necrosis_fac-like_dom (IPR008983) - T[196-330] 1.58E-8
Pfam
TNF_dom (IPR006052) - T[197-330] 3.8E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value