- Transcript 'Moocul.CG.ELv1_2.S40...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S40115.g02023.01.t
Possible name(s)
HERC1; RCC2
Gene model
Location
S40115 [21,004 / 28,309]
Amino acid sequence
Length: 476
>Moocul.CG.ELv1_2.S40115.g02023.01.p
MPRRKKQDVAEVEKKNEISKKSKLEKIVPEEPTATDDVDEECVVKQVEEHPDFKKLCLPS
ESGELLITGGMNWSLNGRKSARKGEENLMDQGRNLFNYHRLKPFCGIKVSKVVSGPTANH
NILLTPDGKAYSWGRNEFGQLGNGGTTRVDTPQLITTLKRFCVVNAAAGRNHTLCLTDSG
LVYAFGDNSTGQIGVGGWNKMVQGPTKIKYSGSPIIDVACGAQFSVVVNCEGHAYTFGCP
EYGQLGNNTDGKYIAKANKVEYNNVSVPERVVGWISKTKAGTELVTDVQIKQVACGSNHT
LALDRKGRVFSWGFGGFGRLGHSEQKDEMIPRLIDIFSRPSRGATKIIAGAKFNIAFGEL
GGIYFWGLQGTIKDGTMYPKPISDLYGWDVRSISCGSKHIVVAADQTVIAWGPATFNGEL
GFGEGRKSSTNPDIVKKMDGTHVLQVACGSVHTMVICRNETEEQRKKIESFPTYSP
Nucleotide sequence
Length: 2,773
>Moocul.CG.ELv1_2.S40115.g02023.01.t
TTTTACAACAGAACGCGTAGGCTAAATTTATGTAGACACATTTGTGTATTAAATAGTTAA
TATGTGTACGCCGGAAGCGTTGGTAGAGCAAGCTGATCAAGCTAAACAGCTTGCTCATTG
TCCATACAGTAATTTCCCTGTTGGAGCAGCTCTGCTTAGTTCAGATGGGAAAATATATAA
AGGATGCAATGTTGAAAATTGTGCCTATCCAGCTACGATTTGCGCTGAAAGAACAGCGAT
TGTAAAAGCGGTTTCAGAAGGATGTAAAAAGTTCGAGTCAATAGCTATTATAACCAATAT
GCAAGATCTGCCAAGTCCTTGTGGGATTTGTCGCCAAACCATGGCGGAGTTTGGTGTGAA
GACGATATACTGTGCTCGTGCTGACAAGACTTACCAAACCTACACATTGGAAGGGTTGCT
ACCAGCTGCTTTTACCCCAGAATCATTGGAGAGCTGCAAATAAAAGCATGCCTACACAAA
GTTATTGCGCATAATACGTTATATCGTGGAAGAGTAGCCTGCTTTCAGATTCCTTCTAGG
ATATCATAACTATATTTATGGATTTGCGTTCTTTATTTTATGGCATTAAAATGTGCAATA
AATATATTTTAAATAACATTTTTGTTAATTGTTTCTAATGCAGTTACGGCCATTGAAATC
GCCTCGACAACTGCTATGCTCTTATGCCGTATGTATGCGATAATTTTTGTTCAGTATTTA
TCTCAGGTAGAGTCCTACCATCGATGGCCCCACTGTCTGTATATTTGCTGTACCGTATAA
GCAGTACTTGCAGTTACTAGAGGTCCAACCAGAGTAATATGACGTGGTTGTAGAAAAGAG
AAATCTTTGGGTTCTAGAAAAAGTCACGCCACAGCATTTTAAAAATAATAACTGGCGTCT
CGTAAAAATTATAACAAAGAAATAAAAAATAAACAGACAGAAGCGCGATTTTATTTTTAG
TTTTGCGAACTGGCAAAGGCACAATTAGTTAACTTTACAACATTTTTTTGGCTACAGCCA
TTATCAAAAAACAACCAACAAATAAATACAAAATGCCCCGAAGAAAAAAGCAGGATGTTG
CGGAGGTTGAAAAAAAAAATGAAATCAGTAAGAAGAGCAAGTTAGAAAAGATTGTTCCTG
AAGAACCGACAGCGACAGACGACGTTGATGAGGAATGCGTTGTTAAACAAGTTGAAGAAC
ACCCAGACTTCAAGAAACTTTGCCTTCCGTCAGAATCTGGAGAACTTCTCATTACTGGAG
GAATGAATTGGAGTTTGAATGGGAGGAAAAGTGCAAGAAAGGGAGAGGAAAATCTTATGG
ATCAAGGTCGTAATTTGTTCAATTATCACCGCCTAAAACCTTTCTGTGGAATCAAAGTGT
CGAAGGTTGTTTCAGGGCCAACAGCCAATCACAACATACTTCTAACACCAGATGGAAAAG
CTTACTCTTGGGGTCGTAATGAGTTTGGTCAGTTGGGAAATGGAGGGACAACACGTGTGG
ACACTCCTCAGCTGATAACAACACTGAAGAGGTTCTGCGTGGTCAACGCTGCTGCTGGTC
GAAATCATACGTTATGTCTCACCGATAGCGGACTTGTTTATGCATTCGGAGATAATTCAA
CTGGACAAATTGGAGTTGGTGGCTGGAACAAGATGGTACAAGGACCAACGAAGATCAAGT
ATTCAGGGTCGCCGATAATCGATGTTGCATGCGGTGCACAGTTCAGCGTAGTTGTAAATT
GCGAAGGTCATGCATACACATTCGGATGTCCAGAATATGGACAGCTCGGCAACAATACGG
ATGGGAAATACATTGCAAAAGCAAACAAGGTTGAATATAACAATGTTTCGGTACCGGAAC
GTGTCGTAGGATGGATATCAAAAACGAAAGCAGGCACTGAACTTGTCACGGATGTTCAAA
TTAAACAAGTGGCATGTGGATCCAATCATACTCTTGCCTTGGATCGTAAAGGTCGTGTCT
TCTCATGGGGGTTCGGAGGGTTTGGGAGGCTTGGACATTCAGAACAGAAGGATGAGATGA
TTCCACGATTGATTGATATCTTCTCACGTCCGTCACGGGGCGCTACGAAGATTATTGCAG
GAGCAAAATTCAATATTGCATTTGGAGAGTTAGGTGGAATTTATTTCTGGGGATTGCAAG
GAACCATAAAGGATGGAACGATGTACCCAAAACCAATCTCTGATTTATATGGTTGGGATG
TTCGTAGCATTAGCTGCGGAAGCAAACATATCGTCGTTGCGGCTGATCAGACAGTTATCG
CATGGGGACCGGCTACTTTTAATGGAGAATTGGGGTTTGGAGAAGGTCGTAAAAGCAGTA
CCAACCCAGACATAGTAAAGAAAATGGATGGTACGCATGTCTTACAGGTAGCTTGTGGAA
GCGTTCACACGATGGTGATTTGCAGAAACGAAACGGAAGAGCAAAGAAAGAAGATCGAAT
CATTCCCTACCTACAGTCCATAATACGCATTGTCATTTCACCACCTCAAAAATACTGTGC
AATTTTTTTGTACCTGTTTTACTGACCAAACACATCTGAGTACCACCAAATGGTACCTGC
GCTATTTATATGTTCGCACTACATTGCCTTTGACTTTTACACTATTCAGTTTGTGGTCTG
TTGTTCAATTCAATTTCTTCAGGAAATAAATGTTTGTTGTAAATTACGTTTTAAAACTCT
TTAATCTTAATATTTAATGTGAATTGGTGAGCACACGATTAAAGATGTTTTGAGTTCTAT
CATAAAATCCATG
| Gene3D |
RCC1/BLIP-II (IPR009091) - T[21-263] 2.7E-40 - T[264-473] 7.0E-37 |
| SUPERFAMILY |
RCC1/BLIP-II (IPR009091) - T[59-460] 2.27E-80 |
| Pfam |
Reg_chr_condens (IPR000408) - T[127-176] 1.7E-14 - T[179-228] 4.0E-9 - T[231-303] 6.7E-10 - T[306-356] 4.6E-9 |
| ProSiteProfiles |
Reg_chr_condens (IPR000408) - T[128-179] 16.072 - T[180-231] 13.419 - T[232-306] 13.097 - T[307-360] 11.871 - T[361-406] 9.539 - T[406-459] 13.599 |
| PRINTS |
Reg_chr_condens (IPR000408) - T[129-145] 3.2E-13 - T[163-176] 3.2E-13 - T[182-198] 3.2E-13 - T[293-309] 3.2E-13 - T[309-323] 3.2E-13 |
| ProSitePatterns |
Reg_chr_condens (IPR000408) - T[166-176] . - T[293-303] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HERC2_HUMAN | 27.152 % | 118 | 3.62E-28 |
| RCC2_HUMAN | 50 % | 452 | 1.14E-155 |
| HERC1_HUMAN | 27.681 % | 132 | 7.62E-33 |
