- Transcript 'Moocul.CG.ELv1_2.S33...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S333.g00003.01.t
Possible name(s)
TGFBRAP1; VPS39
Gene model
Location
S333 [17,584 / 20,353]
Amino acid sequence
Length: 922
>Moocul.CG.ELv1_2.S333.g00003.01.p
MSVKAFNMQLILGRENIMGNKPKVLIECFDISGKNLYIGTNDCCIYHFLLLEDVNDDSTL
KNGIGNPQGLSAFLQNQKKLGLKKSITKIIACNEIKKLLVLCDNALYVYSLMDLSIFPTL
SNKIKNISGIFLNSNPVHANPFSSEICVTFFKKKSLQLYQISDDNLLLLRDVSFSDSVSS
LAIDGRFMCIASAANYSILEIDTSNKLDLFPVTEPPMVQKIAASEFLLTGPNSLGVFVTT
GGISQRPPIQWSESVFQSTYVHPYVIAIDDEFVTVHSIVDQQQKQTIPFQGGIQLLKCDK
KILVCTRKDVFAMTMVPYEIQISSLLKNKMVEEAMNLSKACRKSMSHNDYQQMMNTVYRR
SGFVYLQNMEFDAAEEMFKKGELDARELISLFPNILPESSNFVKSTNLHDIANINEMCNN
DKKSVDKCFNFLCNYLEINIVPELTENSIQRAKNGYSSPNYNGYRNDLFMSCVSVFALRH
VTISMMKLIGVTSHALVDGEILFTDKIFDEFQPNWNTIAKVLDAHKCYHAKATCLLVEQN
LNGAFDIWKKLCRGELIDHDFPGIEFVAKNLAHHCSDIKLLWVHAEWILDLNQNVGTDLF
TAYLPQTQSQGDIFKSSQVKKALVINPDEVIDFLHHYQHSVIIYLEHLVYVEKLEKEKYH
THLVVLYLENILQLLDTPNGIQCTELQETRKKFQEILRHSNLYRITLILSKIKETELYTE
QVILHGKLGEHKQALDILVNLQKDQESAEEYCMQEAVDDNHRKQLFGILLSVYLSKISEA
SSRGSSSVTSAISILNKYAENYDALEVLQMLPNKWSVGVLQQFLTRTLRLPMHTAKTKHI
ENMLAKAENLQLQGEAVKAQTKSVLLTEDKVCMVCNRVFQNSDCVFFPNGVVVHPQCGTN
KYVCPVSGKMFYCQLPQTKHLL
Nucleotide sequence
Length: 2,769
>Moocul.CG.ELv1_2.S333.g00003.01.t
ATGTCTGTCAAAGCTTTTAATATGCAGTTGATTTTGGGAAGAGAAAATATAATGGGAAAT
AAACCAAAGGTTCTTATTGAATGCTTTGATATTTCTGGAAAAAATTTGTATATTGGCACG
AATGACTGCTGCATATATCATTTCTTGTTATTAGAAGATGTCAATGATGATTCTACATTG
AAGAATGGTATAGGAAATCCTCAAGGATTATCAGCATTTTTGCAAAATCAAAAGAAACTT
GGATTGAAAAAAAGCATTACAAAAATTATAGCATGCAACGAGATCAAAAAACTTCTTGTG
CTGTGTGATAATGCCTTATATGTATACAGTCTAATGGATTTGTCGATTTTCCCAACTCTA
TCCAACAAGATTAAAAATATCAGTGGAATATTTCTCAATTCAAATCCTGTGCATGCTAAT
CCATTTTCAAGTGAAATTTGTGTGACATTTTTTAAAAAGAAATCATTGCAATTGTACCAG
ATATCGGATGATAATTTGTTGCTATTACGAGATGTTTCATTTTCTGATTCTGTTTCGTCT
TTGGCAATTGACGGACGTTTTATGTGCATTGCTTCTGCTGCAAATTATAGCATATTAGAA
ATTGATACATCAAACAAATTAGATCTTTTTCCTGTGACTGAACCACCAATGGTTCAAAAA
ATTGCTGCATCTGAGTTTCTATTGACTGGTCCAAATTCGTTGGGTGTTTTTGTGACGACT
GGTGGTATTTCGCAACGACCTCCAATTCAATGGTCAGAGAGTGTTTTTCAATCAACCTAT
GTCCATCCTTACGTAATAGCAATTGATGATGAATTCGTTACAGTTCACAGTATTGTTGAC
CAACAACAAAAGCAGACTATACCTTTTCAAGGTGGAATTCAATTATTAAAATGTGACAAA
AAGATATTGGTCTGTACCAGAAAGGATGTGTTTGCGATGACCATGGTTCCTTATGAAATC
CAAATCAGTTCTTTGTTGAAAAACAAAATGGTTGAAGAAGCGATGAATTTATCAAAAGCC
TGCAGAAAATCCATGTCCCATAACGATTACCAGCAAATGATGAACACAGTTTACAGAAGA
TCTGGTTTTGTTTATTTACAAAATATGGAGTTTGATGCGGCTGAGGAAATGTTTAAAAAG
GGAGAATTGGATGCTAGAGAATTGATTAGTTTGTTTCCAAATATCTTACCAGAATCTTCG
AACTTTGTGAAGTCAACAAATTTACATGATATTGCGAATATCAATGAAATGTGCAATAAT
GATAAGAAGAGTGTGGATAAATGTTTTAATTTCTTATGCAACTACTTGGAGATTAACATT
GTCCCTGAACTGACTGAAAACTCCATTCAACGAGCAAAAAATGGATATTCATCACCAAAT
TACAATGGATATAGAAACGACCTTTTTATGTCCTGTGTTTCAGTATTTGCGTTACGCCAT
GTAACCATTTCTATGATGAAGTTGATTGGAGTAACATCACATGCTTTAGTGGACGGTGAA
ATTTTGTTCACCGATAAAATATTCGATGAATTTCAACCAAACTGGAATACTATTGCAAAA
GTGTTAGATGCACACAAATGCTATCATGCAAAAGCTACATGTCTATTAGTGGAACAGAAT
TTAAATGGAGCATTTGATATTTGGAAGAAACTGTGCAGAGGGGAACTCATTGATCATGAT
TTTCCTGGAATTGAATTTGTTGCGAAGAACTTAGCTCACCACTGTTCAGATATAAAACTG
TTGTGGGTTCATGCAGAGTGGATTCTTGATTTGAATCAAAATGTTGGTACAGATTTATTC
ACTGCTTATTTACCCCAAACCCAATCACAAGGAGACATTTTCAAGTCTTCACAAGTGAAA
AAAGCACTGGTCATTAACCCAGATGAAGTTATAGATTTTCTTCACCATTATCAACATTCT
GTTATCATTTACTTGGAGCATTTGGTCTACGTTGAGAAACTTGAAAAGGAGAAATACCAC
ACTCACCTTGTTGTACTATACTTGGAAAACATTTTACAACTTCTTGATACTCCAAATGGA
ATTCAATGCACTGAGTTGCAAGAAACGAGGAAAAAGTTTCAAGAGATTCTGAGACATTCT
AATTTGTATCGAATAACACTAATATTGAGTAAAATAAAGGAAACAGAACTGTACACGGAG
CAAGTAATCTTACATGGAAAGCTGGGAGAACACAAGCAAGCGTTGGATATTTTAGTCAAT
CTACAGAAAGATCAAGAATCTGCGGAAGAGTATTGTATGCAAGAAGCTGTAGATGACAAC
CATCGAAAACAGTTATTTGGTATCTTGCTGTCTGTTTATTTGTCAAAAATTTCCGAAGCA
AGTAGTCGAGGTTCATCATCTGTTACTTCGGCAATATCTATTTTGAACAAATATGCAGAG
AATTATGATGCATTGGAAGTTTTACAAATGTTACCAAACAAATGGTCTGTTGGAGTGTTG
CAACAATTTTTAACAAGAACATTAAGACTGCCGATGCACACTGCGAAGACTAAGCATATT
GAAAACATGCTTGCCAAAGCCGAGAACTTGCAACTTCAAGGTGAAGCGGTAAAAGCTCAA
ACTAAATCTGTTTTACTAACTGAAGACAAAGTATGCATGGTCTGCAACCGAGTTTTCCAA
AACTCAGATTGTGTATTCTTTCCTAATGGTGTTGTAGTTCACCCACAGTGTGGCACAAAC
AAATATGTGTGTCCTGTGTCGGGGAAAATGTTTTACTGCCAACTCCCCCAAACTAAACAT
TTATTGTGA
| PANTHER |
Vam6/VPS39/TRAP1 (IPR032914) - T[19-900] 6.8E-161 |
| SMART |
CNH_dom (IPR001180) - T[21-308] 0.0025 |
| ProSiteProfiles |
CNH_dom (IPR001180) - T[23-302] 20.882 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[28-53] 3.87E-6 - T[81-207] 3.87E-6 |
| Pfam |
CNH_dom (IPR001180) - T[73-288] 9.8E-17 |
| ProSiteProfiles |
Clathrin_H-chain/VPS_repeat (IPR000547) - T[615-778] 21.853 |
| Pfam |
VPS39/TGF_beta_rcpt-assoc_2 (IPR019453) - T[792-898] 1.4E-26 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VPS39_HUMAN | 23.83 % | 172 | 3.95E-44 |
| TGFA1_HUMAN | 35.378 % | 589 | 0 |
