- Transcript 'Moocul.CG.ELv1_2.S27...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S2785.g00060.01.t
Possible name(s)
SNRNP35; SNRNP70; TERF2IP
Gene model
Location
S2785 [232 / 4,331]
Amino acid sequence
Length: 506
>Moocul.CG.ELv1_2.S2785.g00060.01.p
MSDSRAKSNWKAIVDVYDPIKCGSIDGTDTVPHDKAIVRALNSNYDPYQGKDSDPSSTIF
VGRLHHSTLEDEIKDAFSTYGKIRSLKLIRDIVTGFPKGYCFVEFEDESSTHKAVNDKQS
ILLHNQKLLVDYEFGRNMKNWVPRRLGGGFGGKKESGQLRFGCKERPFKKPLMLVKSYRY
KISTTHQYYNILIDMFVTEDGPMTFCLRPCVEKKKIKDIILKNGGKCVPNKFMLSEDKRK
SVIMLVPDEKIANFEGDGYHINFILECGKQGKLLPLQDFKIRMKIPSPKKGRNEYTEMED
QAILKLVSQNKNGLVLTGNKFWKIAATEDCFKERGRTWQSLKDRFLKRLRKKTQNENAEV
RQERSISETSQDTASELEPTENALPHGSDGDTAEDEQKIAEFLSNITETDKTIAYKCLFK
FNGNISAAKYFIKNGICKNGYFLLSDEEDNLLLKSLMGNADGKDSMELLRKTYGENFIKE
RCICLWKVEENDLDILHDINLDKLKK
Nucleotide sequence
Length: 2,826
>Moocul.CG.ELv1_2.S2785.g00060.01.t
ATGTCAGATTCACGGGCAAAATCTAACTGGAAGGCGATTGTTGACGTCTACGATCCTATT
AAATGTGGAAGCATTGATGGAACAGACACTGTACCCCATGACAAAGCCATTGTACGCGCC
CTGAATTCCAATTACGATCCATACCAAGGTAAAGACAGTGATCCATCCAGCACTATTTTT
GTTGGAAGACTCCATCATTCAACACTTGAAGATGAAATTAAAGACGCATTTTCCACATAT
GGAAAAATAAGAAGTTTGAAGTTAATTCGAGATATTGTCACTGGCTTTCCCAAAGGATAC
TGTTTCGTTGAATTTGAGGATGAAAGTTCTACTCACAAAGCTGTTAACGACAAACAAAGT
ATACTTTTGCACAACCAAAAACTTTTGGTAGATTATGAGTTCGGTCGAAACATGAAAAAC
TGGGTTCCAAGGAGACTTGGTGGTGGGTTTGGTGGAAAAAAGGAGTCCGGACAGCTACGA
TTTGGATGCAAAGAAAGACCATTTAAAAAACCTTTGATGCTTGTAAAGTCATATCGATAC
AAAATATCAACTACACATCAATATTATAATATTCTTATTGACATGTTTGTCACTGAAGAT
GGTCCGATGACCTTTTGCCTTCGTCCATGTGTTGAGAAAAAAAAGATCAAAGATATCATA
TTGAAAAATGGAGGAAAATGTGTTCCTAACAAATTTATGCTGTCCGAAGATAAAAGGAAA
TCTGTAATAATGTTGGTCCCAGATGAGAAGATTGCAAACTTTGAAGGTGACGGGTACCAT
ATTAACTTTATACTTGAATGCGGAAAACAAGGAAAACTTCTGCCACTACAGGATTTTAAA
ATAAGAATGAAAATTCCATCGCCCAAAAAAGGTCGCAATGAATACACAGAAATGGAAGAT
CAAGCTATTCTGAAGTTAGTATCTCAAAATAAAAATGGATTGGTACTGACCGGGAATAAA
TTTTGGAAAATTGCTGCCACTGAAGATTGCTTCAAAGAACGTGGTAGAACATGGCAATCC
TTAAAAGATAGATTTCTAAAACGACTCAGAAAGAAAACGCAAAATGAAAATGCTGAAGTA
AGACAAGAAAGATCCATCTCTGAAACAAGTCAAGACACAGCATCTGAATTGGAACCTACA
GAAAATGCTTTACCGCATGGGAGTGATGGCGATACCGCAGAAGATGAACAAAAAATAGCA
GAGTTTTTATCCAACATTACGGAGACAGACAAGACCATAGCTTATAAATGCTTGTTTAAA
TTTAATGGAAACATCTCTGCAGCAAAATACTTCATTAAAAATGGGATATGTAAAAACGGT
TACTTTTTACTGAGTGACGAAGAAGATAACTTATTATTAAAAAGCTTGATGGGAAATGCA
GATGGCAAAGACAGTATGGAACTGCTAAGAAAAACATATGGGGAGAACTTCATCAAGGAG
CGGTGCATATGCTTATGGAAAGTCGAAGAAAATGACTTGGATATATTGCATGATATCAAT
TTGGATAAACTGAAAAAATAGAGACCATCTTGTTGAAAGTTTGAAAAGAGGAAATGCCAT
GTTTCCTGATATGAATATCCACGTTAAATGAATTGGATGGATTAGTTGTTAATGAACTAT
CATAACGGTAAGTATGATGATTTTATGGGATATTTCGTTGAATGTTGTCACTGGCAAATG
CTTTGAACTTCTTTTGTAGTTTGAGTTTACTGTTGCTATTTGCAAATATATGGTCTACAG
CCGTATTTGTTAAATTGAACAATTCATTACAGCTCAGGTTACAAGCAAGCGCGGCTTTTA
CATATTCTTGCGAGAGTGTAGTGTTGAATACCCCTTTGTCATCAGTGCATACTATAATAG
GATGATTGATTTTATACCAGTCAGCGACATGATGTTCAACGATAGAAGCCGCTGTCCCGC
ACATTATATTCGATGTAATGTTCATTTCTATGGGAGTTTTGTTTCTGAGTACTTGGTCAT
AACATGTGGTGTTTTCTTGTATGTAAGTGGCATGCCCAATCCGGTCAGGAAATAAGTTCA
GTAATTTTTCGGTTTCAACATCAGAGTCTGGGATTTCGGCAACATGCAGTGCAAGTTTCA
ATCCTGAGTTTTTAGCAGATGTTAACACAGGAATAAAGTCGTCAATGTTTCCCTTCCTTG
GATCTCCACTTAAATCTAATCCAACAACGTGCTCAGTCGAAGTTGAAAATTCTTTGGCAA
TTTTTAAAGTTTCTAATGCATCTTCAACACTATACTGCCTGTTAATTGAAAGGAGAAACT
TAACTTCAATATGGTCATTTTCATGGTTGTATGATTCAATGCAGTTTAATATTGTTTGGA
CATATTCTCTTTTAGAATTATTTTGTAAGTTTCTTGGTGTACTTCTCAACTCTAAGTATG
CCACATTGTCCTTGTGAAAATCTGAAATTACATCCAGTGTAATTTGTTTCAAAACATCCA
AAGAGTTTGTTAACCTGTGCACCAAACTAAACTTGGAAAAGCAATCTTGAAAAGTAAGTT
TTTGCATTCGGAATGATTCAGATTCGTCACTTTGTTTTAACAATGTAGATAGTGTAGAAT
CGCTGATAGAGCCATTCAAGTGAGCATGCAGTTCAACTTTAGGAAGTTTTTGACAAAATC
TTTCTATTGTTTCTGAAGTTGCACTCATGTTTCACAATTCAGGCTTTTGTAGACCAAGTT
CTCAAAGTTGTAAAAAGAATTATTAAATTGATTGCTTGCTTATAACCATCTGACGGATAC
TGAATGGTAAAATACTGAATAGGTAATATATTAAAGTTGGTTGAACCGTGAACGGGTCCG
TTTTCG
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[47-159] 4.34E-27 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[48-162] 5.8E-28 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[57-139] 16.705 |
| SMART |
RRM_dom (IPR000504) - T[58-131] 1.5E-21 |
| Pfam |
RRM_dom (IPR000504) - T[59-128] 5.5E-19 |
| Pfam |
BRCT_dom (IPR001357) - T[201-279] 9.8E-8 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[291-350] 1.61E-7 |
| Pfam |
Rap1_Myb_dom (IPR015010) - T[291-355] 1.5E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| U1SBP_HUMAN | 52.695 % | 171 | 3.44E-50 |
