- Transcript 'Haaura.CG.MTP2014.S4...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Phfumi.CG.MTP2014.S1...' >
- Transcript 'Moocul.CG.ELv1_2.S12...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S128768.g15112.01.t
Possible name(s)
LNX2; RNF146; RNF168
Gene model
Location
S128768 [10,102 / 12,791]
Amino acid sequence
Length: 333
>Moocul.CG.ELv1_2.S128768.g15112.01.p
MCSNDKGTPPLTREDTSDCAICMQPCLQPVKFPCNHVFCFLCAKGIACQSRCCALCRAPI
PNDFIRNPNNFKHASKQKAHKDDNNMSKDSYVWFYQGYQGWWQYDERSSKEIEEAYQNQN
TSLQVLIAGNLYYIDLVNMQQYQANRASRKRSIKRDKVEVQKKGVAGMADDSCTPSTSST
NMHHQAPAIDLTQATNMPVAVVDLSQSNVRPVVDLSQSNVRAVVDLTQSNTVTQSNQPLD
LSMSGRVRSLSNQPDVVTSTLRMMPVGSATDNVYPYSGASQENNMELDTDSEEEEDGDGG
VPMTRSLSSNIDNHPTNRSSENVPNMLRSNTLK
Nucleotide sequence
Length: 1,999
>Moocul.CG.ELv1_2.S128768.g15112.01.t
ATTTTATTGCCATAGGCCTAGCCAAGATATTGCACCCTATAGCTGTATACCGGTAGTAAA
AGTAAGGTAATCATATCAATGAAGCAATGAGTCGGAACCCATCAAAATATGCACAGAATA
TTGGCAAATTAAGTGCACAAATATTTGGAGAAGCGCTTCCACAACATGAACGAAAAAGTC
GTAAAGTGATTGAACTAATGTCGCGGCAACCGGTGAAATACAAGCGTCAAGTTACACATT
ATTACCCACCGATTAAGGACATGACTTATATGTTATTAACTTTACGGAAACTTGGTTTAT
ATGTTGATGAACATGAAGATTTTAAAGAAGAAATGGAACGCCAACGGGAAGCTCGCGGAA
AGGGAAAGAAAAATAAGAAAACAAAAAATTAAATACAATATTTATATATTGATAAACTTT
CTTTGTTACCATCACAAAATGAAGTGTTTTTAAAAAATATCACATACAGCATTTAGCGAT
ACCATCCTTATTTATTATCGTACACTTCCATTTTTGTTTTAAAAATATTCATAGGCCTAG
GACTTCTTTAACGGCCAAGCTAAGTATCACCTATAACTGTGTTCGTCTGAATTTTTCACG
ACTAGTTAATGCTATAAAAGCAGAATAATGTTAAGATTGAATTTTTTATTGTGCTTGCTG
TGTGTGTAGTTTAATTTAAGAATATGTTTTAGATTCAATTATATTTTGTTGGCACTTCAC
AATTGTGTGACAAGTGACGTGACTAGAGTTTATTGTTAGTACAATGATACTGGAATTTCT
GGAAGCTTAAAAGTTGTCATCTTTGTTTTTGTCCAAGATGTGTTCCAATGATAAAGGCAC
GCCTCCACTGACCCGAGAAGACACAAGCGACTGTGCCATTTGCATGCAACCATGTCTTCA
GCCTGTCAAGTTTCCTTGTAATCACGTATTTTGCTTTTTGTGCGCAAAAGGAATCGCATG
TCAGAGCAGGTGTTGTGCATTGTGTAGGGCACCGATTCCTAATGATTTTATACGGAACCC
AAATAACTTCAAACATGCATCTAAACAAAAGGCCCATAAAGATGATAATAATATGTCCAA
AGACAGTTACGTGTGGTTCTATCAGGGATACCAAGGCTGGTGGCAATACGATGAAAGGTC
AAGTAAAGAAATTGAGGAGGCTTATCAAAATCAAAATACTTCACTTCAAGTACTAATTGC
TGGAAACTTGTATTACATTGATCTTGTCAACATGCAACAATACCAAGCGAATCGAGCATC
TCGGAAACGTTCCATTAAACGTGATAAAGTTGAGGTTCAGAAGAAAGGTGTTGCAGGAAT
GGCTGATGATTCTTGTACTCCAAGTACAAGCTCAACTAATATGCACCATCAGGCACCAGC
AATTGATTTAACTCAGGCAACAAATATGCCTGTTGCCGTCGTGGATTTATCACAATCTAA
TGTTCGACCAGTTGTTGATCTGTCGCAGTCCAATGTAAGAGCAGTCGTTGATTTAACACA
GTCAAATACAGTAACTCAATCGAACCAACCATTGGACTTATCAATGTCGGGCAGAGTGCG
GTCGTTAAGTAATCAACCGGATGTGGTGACATCAACATTGAGAATGATGCCTGTTGGATC
AGCTACGGATAACGTATATCCGTATTCCGGTGCTTCTCAAGAAAATAATATGGAACTAGA
CACAGACAGTGAGGAAGAGGAGGATGGTGATGGAGGTGTGCCGATGACACGATCATTGTC
ATCAAATATTGATAACCATCCTACAAACCGTTCAAGTGAAAACGTACCAAATATGTTGCG
ATCGAACACTTTAAAATAAGTCAACATTATTCTTTCATGTACATTTTCTTGTTGTGAGCA
CTTATTCTGCTGTGACTGTGTTTTATTGCATTTTACTATCACATTCTTTTCCTTTCGTTA
AATTAAAATTTTTTTTCATTTATGTCATTGGAAGTGGGAGACCTTCACATGGTATTATGA
CTAAATGGGCCATGGCGTT
| PANTHER |
RNF146 (IPR033509) - T[8-169] 1.1E-59 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[8-90] 4.6E-11 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[19-57] 10.262 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[34-43] . |
| ProSiteProfiles |
WWE-dom (IPR004170) - T[79-155] 20.949 |
| SUPERFAMILY |
WWE_dom_sf (IPR037197) - T[82-168] 6.15E-25 |
| SMART |
WWE-dom_subgr (IPR018123) - T[88-163] 1.8E-18 |
| Gene3D |
WWE_dom_sf (IPR037197) - T[91-170] 4.2E-26 |
| Pfam |
WWE-dom (IPR004170) - T[91-155] 7.1E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RN146_HUMAN | 40.654 % | 172 | 5.68E-51 |