- Transcript 'Moocul.CG.ELv1_2.S12...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S126664.g14799.01.t
Possible name(s)
LMBRD2; TTC32; TTC6
Gene model
Location
S126664 [12,199 / 21,790]
Amino acid sequence
Length: 811
>Moocul.CG.ELv1_2.S126664.g14799.01.p
MTVGPFIFELLIVLLLSVGLLHHYGRIRRQHPIVTIATLTSWYFSLIIIFILPLDVSSAF
YRQCLSQNAHPTIATTTTISSTIETQHNNTNTTNLGRQQRSEDKNVTPLTICEEPYDHVP
DITLQVMWRIVYWSSQLLTWIILPFMQSYSYSGEFTPSGKVKHALLKNAVYYGTYLAIVI
ALLVYVAANPKLRLDFSQLKVICITASNTWGLFLLVLLLGYGLVEFPRSVWNSSNPFVSI
AYTHFKLAKLSTEKQEAMENLEDLLEQIKDISNSVRYNHPLRKYVNMIISKCPDEFQDKV
SQGMDDYEDYDDGSRSRSEPTEKMLTSLHGKIIRAMQTKQRTTVQWDINMRTALHLDNVI
KNKKQTVRVWVEETVNESSEKSWFSQVFCQPTVRWYWECVLRGIVFKILAICLVVLSFMV
IWSECTFFNDSPVLSLFAIFLNHAGANYNYFYIELASFCIISYMCVCAYYTVFRIKFFNY
YYIAGHHQTNEISLMFVGIMLCRLTPPLCLNFLGLIHLDAHVASNAVVDHETFYTKIMGH
LVVIPIISKGFNIYFPILMVVLCIATYFSLGHRCLSAIGFQQFISGNMSDEFTADLVEEG
RQLVNREKRKQMREFKHLSRRGNGMSSDSDSNIKSRQWQGRVMREVDMTKKSKKNDKFEL
LNDAEDMDYSTINNEEEDENIISGSSSGSRWNRTPSSQWSNNRTFGNNRPPSNIFDDMKT
VAEAYNNRGQIKYLRVDFGEAIEDYTEAINILPTFHIAYYNRGQIHYRLGRYNQAIPDFE
KALDLEPTFFHAEDAIKTAKEEQALNGDKTW
Nucleotide sequence
Length: 4,227
>Moocul.CG.ELv1_2.S126664.g14799.01.t
ATGACTGTTGGACCATTTATATTTGAACTGCTTATTGTATTGCTGCTGTCAGTGGGTTTA
TTGCATCATTATGGAAGAATTCGAAGGCAACATCCCATCGTAACCATAGCAACACTGACA
TCATGGTACTTCAGTTTGATTATTATATTCATTCTGCCATTGGATGTTTCGAGTGCGTTT
TATCGACAATGTTTATCGCAAAACGCACATCCTACCATCGCCACGACTACCACCATTTCG
TCAACCATTGAAACTCAGCATAATAATACAAACACCACAAATTTGGGCAGACAGCAACGT
TCGGAAGATAAAAATGTGACACCTTTAACTATTTGTGAAGAGCCTTATGATCATGTTCCA
GATATAACGCTGCAAGTTATGTGGAGGATAGTTTATTGGTCTTCTCAGTTGTTAACTTGG
ATTATACTTCCTTTCATGCAGTCTTATTCATACTCTGGTGAGTTTACACCCAGTGGCAAG
GTGAAACATGCTCTTCTTAAAAACGCTGTTTATTATGGAACATATCTTGCAATTGTTATC
GCTCTGCTTGTTTACGTGGCAGCTAATCCAAAACTACGACTGGATTTTTCACAACTAAAA
GTCATTTGTATTACAGCATCAAACACATGGGGTTTGTTCTTGCTGGTATTATTGTTGGGT
TACGGCTTGGTTGAATTTCCACGAAGTGTTTGGAATTCATCTAATCCGTTTGTTTCGATT
GCTTACACACATTTCAAACTTGCTAAACTTAGCACGGAAAAACAAGAAGCCATGGAAAAT
TTGGAAGACCTTTTGGAACAAATAAAAGATATTAGTAATTCTGTTCGATACAATCATCCT
TTACGCAAATACGTCAACATGATAATCTCAAAATGTCCTGATGAATTTCAAGATAAAGTC
AGTCAAGGAATGGATGATTATGAGGATTACGATGATGGTAGTAGAAGCAGAAGTGAACCA
ACGGAAAAAATGCTGACGAGTTTGCATGGAAAAATCATTCGAGCGATGCAAACGAAACAG
AGAACAACAGTCCAATGGGATATAAACATGAGAACCGCGCTGCATTTGGACAATGTAATA
AAAAACAAGAAACAAACAGTGCGAGTTTGGGTGGAAGAAACTGTGAATGAGTCATCTGAG
AAAAGTTGGTTTTCACAAGTATTTTGTCAACCAACAGTTAGATGGTATTGGGAATGTGTT
CTGCGGGGAATAGTTTTCAAGATTTTGGCCATCTGTTTGGTGGTTTTATCTTTTATGGTG
ATTTGGTCCGAATGCACTTTCTTCAATGATTCTCCTGTGCTTTCTTTGTTTGCGATCTTC
TTAAATCACGCCGGTGCAAATTACAACTACTTTTACATAGAGCTTGCCAGTTTCTGCATC
ATATCTTACATGTGCGTTTGTGCGTATTACACTGTTTTCCGAATAAAATTCTTCAACTAT
TATTACATCGCTGGTCATCATCAGACCAACGAAATAAGCCTCATGTTTGTTGGTATAATG
CTCTGCCGTTTGACTCCACCATTATGCTTAAATTTTCTTGGATTAATCCATCTGGATGCT
CATGTTGCTAGCAACGCTGTGGTTGATCACGAAACATTTTATACAAAGATTATGGGTCAT
TTGGTTGTGATTCCAATCATTTCAAAGGGATTTAATATTTACTTTCCGATTCTCATGGTG
GTTCTGTGCATTGCGACATACTTTAGTCTCGGCCACAGATGTTTGTCTGCAATCGGCTTT
CAACAATTTATCAGCGGAAATATGTCAGATGAATTCACTGCAGATTTAGTGGAGGAAGGA
CGGCAGCTGGTCAATCGCGAAAAGCGCAAGCAAATGCGTGAATTTAAACACTTGAGTCGT
CGTGGAAACGGAATGTCTTCTGACAGCGACAGTAATATTAAATCACGACAATGGCAAGGG
AGGGTCATGCGGGAAGTTGATATGACGAAGAAATCAAAGAAAAATGACAAATTTGAGCTT
CTGAATGACGCTGAAGATATGGATTATAGTACAATAAACAACGAAGAAGAGGATGAGAAT
ATAATAAGTGGAAGTAGTAGCGGTTCACGATGGAACCGAACACCGAGCTCACAATGGTCA
AACAATCGAACATTTGGAAACAACCGACCACCCAGTAATATATTCGATGACATGAAGACT
GTGGCTGAGGCTTACAACAATCGAGGACAAATTAAATATCTTCGTGTGGATTTTGGTGAA
GCGATCGAAGATTATACTGAAGCCATAAATATCCTACCAACATTCCACATTGCGTATTAC
AACCGAGGACAAATACACTACAGATTAGGGCGATACAATCAAGCCATTCCAGATTTTGAG
AAGGCTTTGGATTTAGAGCCAACGTTTTTTCATGCAGAAGATGCTATTAAAACAGCAAAG
GAAGAACAGGCTTTGAATGGTGATAAAACCTGGTGAAATGAGAAATGGCTAACGCAATAC
GAACCGTGTCATTTGTACGACATTTGGAACTGAAAGTGGATCGAGATGTTTTACCAAATG
CAATCAAACTCGGAGATGTTGATAATGACAAAGGCAATGAATTGGTTGTTGGAACTATAA
GTGGCATGTTGTATGTATTTCGGGGACATGAAACACAAGCAATTTGGGAACATTCTGATC
TTGGCTTCATTACCTGCCTTACAGTTGGAGATGTTCTTCATGAAGACAGCAATTCGCTTC
TCGTTGTCAACGCTGAAGGATACTGCCGCATATACTCAAGTCATAAACTCTCGAGCAACT
TACAACTGGTGCATAAACAGATGTTGAAAGGAAATGCTCGGACTGTTCTGCTTGGTGATG
TTGACAATGATGGACGGCTGGAACTCCTGATGAGTCATACGGACCGAATGGTTTCTGCCT
ACAGGTGGGACAGTGAAAAGCGCGAATTGATTTTCCTACAGGATTGGCATCTACGAAACC
AAATAGGATGCATCACACTTCACCATAACAGCGAGAATGACGCTATTATCATCGCAAGTC
AACCTGGAGCAATGTGGGCAAAATTAAGAGCAATTTGGCACGACGAAGAAGCACTTGCTA
ACAGTCGAAATGATTCATACGATACCATCGAGTACTCTGTAATGCCAAGAGCACACAATC
CTTCAGTTACTTGTCAAATCGTTGGTGACATTTTAAAAGGGAGTCAATCAAGTTCCGGAT
ATTTTGCAATCTGCACATTGGATGGAAATATAAAACTTGTTGAAGATGGTGAGACTTTGT
GGTCGTTTCAAGTCGACTATCAGCTTTTTGCCATCGCCAAACTTGATGTTTTGGGCAACG
GAAAGGAAGAAGTGATCATTTGTTCGTATGACGGACAGACATATATTATCGATCATGATA
AAAATCTTGTGCGTTATCAATTTGAAGATACTGTTAAGGCATTTTGCGCTGGTCAATATG
CAATTGACGGTTGCGATGAAAATGTGCCTTGTCTCCTTTATGTTGATTATAAGAACCGAA
TCAAACTTTATTACGATATTGAACTTCCGCATTTACAAGCGACAGACTTTTTGTCGTATG
TCGAAAAAGACCATGAAATCACTGACATGTTTCAAAAGTTAAATTTGCGAACTGTGGAGG
AGAAGCGAAAGTTTGTGCAGTATTTCATGTATAAACATCCTGCCATGAAGAAAACCATCA
TCACTGAAGAACCTGATACTACTGAGAGCAAATAACCATGTCAGCAATTTATTATTTTTG
TTTTAAGCGATTACAAATAAATATTTATATGTAACTCTTTTGAATACTGCTTTGCATTGC
AGCCTATGTTGATTTCTTTGGCAAGATACCTTTAGTATAGTATTTACTTATTTAACGCTG
TCATTTTTCAATTTCTAGCAATACAACACCAACATGTGATGGGTGGAATCTTTGTCTACG
ACGTAAACAATGAGCATTCGTCTTGCAAGCAGGAATGTATATAAAGTCAGGGGAGTCTAA
ATCGATTCTCTTAAACCAGTCTACGCGGATCTGCTGAATCCATTTTGAGTACAATACACA
CAAAATTTAACTTTTTTAACATTGCATTGAAAACGTACGATTTAGACTCGTCTTAAATAT
CTTTTCTCGCATCATGACGCGAATTAGACTAACGTCTTAAACATCCCTGGTTGGTCAAAT
TGGCCGCTTTGGTATTTTAAAATGCCAGTTGTGCGGGAGACGAAGGAAGATGCCATCCTA
TGTTTTTCTGACCAATAGCACACCGAC
| Pfam |
LMBR1-like_membr_prot (IPR006876) - T[2-571] 5.9E-170 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[661-809] 1.1E-20 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[717-794] 2.6E-20 |
| ProSiteProfiles |
TPR-contain_dom (IPR013026) - T[722-789] 22.095 |
| ProSiteProfiles |
TPR_repeat (IPR019734) - T[722-755] 9.942 - T[756-789] 13.157 |
| SMART |
TPR_repeat (IPR019734) - T[722-755] 1.2E-5 - T[756-789] 1.3E-9 |
| Pfam |
TPR_1 (IPR001440) - T[758-789] 4.0E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LMBD2_HUMAN | 46.396 % | 583 | 0 |
| TTC32_HUMAN | 55.814 % | 99.8 | 2.13E-24 |