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  3. Transcript 'Moocul.CG.ELv1_2.S12...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S126286.g14731.01.t

Possible name(s)

NUP50; RANBP2; RGPD1

Gene model

Moocul.CG.ELv1_2.S126286.g14731

Location

S126286 [5,185 / 7,909]

Sequences

Amino acid sequence

Length: 410

>Moocul.CG.ELv1_2.S126286.g14731.01.p
MERPSKRGADNYLTHDNWDQEDKGEEDAGIFKKADEDTLKRRVIKRAARRIPASTNSGGN
GGGAFAKFGGLKSSSSSTTASVKNQFAFLNKKADEQTKTPAFSLGVSVDQKSSDVGSSSQ
NKENVSEYNRHLAALNKSVSEWITKHVDKNPMCDLSPVFKDYKKHLNQIEEKYLSSQSES
SQSTMSDSQETQEKPSFKLTGFEAKTNKVETKIEQAPVTTSVQKPVFSGFNTGTSSPFTG
FEIGSKGSSGFSFGAQATSETKPKKEDDDAKKTDATAGEVTAEGDYQPPVAETGVIEEEG
AIYTKRCKLFYSKEGSYVERGIGNIYLKKVEEKTQLLMRADTSLGNILLNVLLQRSMPTK
RLGKNNVTIACLPNPPIDKEEAKLTTLLIRVKTSDDADELLKLIDENKSL

Nucleotide sequence

Length: 1,625

>Moocul.CG.ELv1_2.S126286.g14731.01.t
TTTTGTTGATGAGGTTGATCATTTTAACGCAGAACGTGTTGTTATTTTTACTTTCTGGCA
GTCTGGTAAGTTCAGACCGACACTAACAAATATGGAGAGGCCTAGCAAGAGGGGAGCCGA
CAATTATCTCACTCATGACAACTGGGACCAGGAGGATAAGGGGGAAGAAGATGCGGGAAT
ATTTAAAAAAGCTGATGAAGACACTTTAAAACGAAGAGTTATAAAAAGAGCTGCAAGAAG
AATACCAGCTTCTACGAACAGCGGAGGAAATGGTGGCGGGGCATTTGCAAAGTTTGGAGG
ACTGAAATCATCATCATCATCCACAACAGCAAGTGTAAAGAATCAATTTGCATTTCTTAA
TAAGAAAGCGGATGAGCAGACCAAAACACCAGCATTTTCCCTTGGCGTTTCTGTTGATCA
GAAATCTTCAGATGTTGGCAGCTCTTCACAGAATAAAGAAAATGTTTCCGAGTACAACCG
CCATCTCGCTGCACTTAATAAAAGTGTTAGTGAGTGGATAACAAAACACGTTGACAAAAA
CCCGATGTGTGATTTGTCTCCTGTCTTCAAGGATTACAAAAAGCATTTGAATCAAATCGA
AGAAAAGTATTTGAGTTCGCAATCTGAATCATCGCAATCAACGATGTCTGACTCACAAGA
GACCCAAGAAAAACCAAGCTTTAAATTGACTGGATTTGAAGCGAAAACGAACAAAGTTGA
AACAAAGATTGAACAAGCACCGGTGACAACTTCGGTGCAGAAACCTGTATTTAGTGGATT
TAACACCGGCACTTCGTCACCATTCACTGGATTTGAAATTGGCAGTAAAGGTTCTTCCGG
GTTCTCGTTTGGTGCTCAAGCAACTTCAGAAACCAAACCAAAGAAGGAGGATGATGATGC
TAAGAAAACTGATGCAACTGCAGGAGAGGTGACAGCCGAAGGAGATTACCAACCTCCGGT
TGCGGAGACGGGAGTTATTGAAGAAGAAGGAGCAATTTACACTAAACGATGTAAGCTGTT
TTATTCGAAGGAAGGGTCTTACGTGGAACGAGGTATTGGAAATATTTACTTGAAGAAAGT
TGAAGAGAAAACACAACTACTGATGCGTGCCGACACATCACTTGGCAACATACTTTTGAA
TGTGCTACTTCAGCGGTCGATGCCAACAAAACGACTCGGAAAAAATAATGTGACAATCGC
ATGTCTGCCAAATCCTCCAATTGATAAAGAAGAGGCAAAGTTGACAACACTTCTTATTCG
TGTGAAAACTTCCGATGATGCAGATGAACTTTTAAAACTAATCGACGAAAACAAATCTTT
ATGAAGAAAATAGTTGCCATGCCAATGGCTGCCTGGTTACAAAAGCAATTTTAGTACAAT
GTTCTTCTTCTATTTCTTGTTCGTTCCACCCGTACCATTACAATACTGTAATACATGTTG
CAAGTCAAATGTTGCGAATTTAAAAGTGGTACTTTTAAACTGCATTAACATGAACCAATG
CCCAATTTTATAATTTGATTACATGAAATTTAGTTCAGTTCCAACTAAGTAAAATTTAAA
AGTGTTTGTCTTGCGAAGATCCATACTTCTGTTTATACTTTCAAATATAATTGAAAAAAA
CTAGA

InterProScan

Pfam
NUP2/50/61 (IPR015007) - T[5-73] 5.6E-20
Gene3D
PH-like_dom_sf (IPR011993) - T[228-408] 4.8E-34
SMART
Ran_bind_dom (IPR000156) - T[287-407] 3.5E-8
Pfam
Ran_bind_dom (IPR000156) - T[297-408] 4.6E-14
ProSiteProfiles
Ran_bind_dom (IPR000156) - T[297-410] 11.344

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NUP50_HUMAN 37.131 % 239 2.36E-74