- Transcript 'Moocul.CG.ELv1_2.S12...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S125857.g14704.01.t
Possible name(s)
VPS36
Gene model
Location
S125857 [43,829 / 44,993]
Amino acid sequence
Length: 387
>Moocul.CG.ELv1_2.S125857.g14704.01.p
MDRFCWSEVSCQPPEYKQFEAKSTRLYDGDGKTSFDDGTVSITTHRLLWQDSSNSACVLS
VYLNLISNTEKHPGSFSRSPKIVLHLTSSGSNKLPGPMSHSRYSFVKISFKNHGIDDFYN
TLLTMLQARQWDAVPLTGTNQGSSTVPKPRIKGKGIVGIERKIEAKQRQTNEAISTSFQD
LSKLMEKAKEMVSLSQTIAGKIKDKQGDITEDETIKFKSYLLSLGIPNPVTKETHGSGTH
YHMQLARELSKLLLPVLEENGGIILLSDAYCRSNRARGMELISPDDMLNACRVMEHMKLP
TRLRMFDSGVSVLQLDTHNDDIVMSQTSQLVEDSTCLSAQQLANIIDISVVLAKERLLLA
EKHGKVCRDDSVEGLKFYPNLFLTAIR
Nucleotide sequence
Length: 1,164
>Moocul.CG.ELv1_2.S125857.g14704.01.t
ATGGATCGGTTTTGCTGGTCAGAAGTTTCTTGTCAACCTCCAGAATACAAGCAGTTTGAA
GCAAAATCGACACGACTTTACGATGGTGACGGTAAGACTTCATTTGACGACGGAACAGTT
TCTATAACAACACATCGATTGTTATGGCAAGATTCTTCGAACAGCGCTTGTGTGCTATCA
GTATATTTAAATTTAATTTCAAACACCGAGAAGCATCCTGGAAGTTTCAGCAGAAGTCCA
AAAATTGTTCTTCATTTAACTTCATCTGGTTCTAATAAACTACCTGGACCGATGTCACAC
AGTCGATATTCATTTGTGAAAATATCATTTAAGAATCATGGCATTGATGACTTTTATAAC
ACACTATTAACCATGTTACAAGCTCGCCAATGGGATGCTGTCCCTCTCACAGGAACGAAC
CAAGGATCTAGTACTGTGCCAAAACCTCGAATTAAAGGGAAGGGAATCGTGGGGATAGAA
CGAAAAATCGAAGCCAAGCAACGTCAAACAAATGAGGCAATTTCGACATCTTTTCAAGAT
TTATCAAAGTTAATGGAAAAGGCTAAAGAAATGGTTTCTCTTTCACAAACAATTGCTGGA
AAGATCAAAGATAAGCAGGGCGACATAACAGAAGATGAAACAATTAAATTTAAATCATAT
TTGCTCAGCCTCGGAATACCAAATCCTGTCACTAAAGAAACTCATGGAAGTGGAACTCAT
TATCATATGCAACTTGCAAGAGAGTTAAGCAAACTGTTACTCCCGGTGCTTGAGGAGAAC
GGTGGAATAATCCTTCTCTCAGATGCTTATTGTCGAAGTAATCGAGCTCGCGGCATGGAA
CTTATCTCACCTGACGATATGTTGAATGCGTGCCGAGTCATGGAACATATGAAGTTGCCG
ACTCGTTTACGCATGTTCGACAGCGGTGTTTCTGTTTTGCAATTGGACACGCACAACGAT
GATATAGTGATGTCACAAACATCACAACTTGTTGAGGACAGTACATGTTTATCAGCGCAA
CAACTTGCAAACATTATTGATATTTCTGTGGTTCTGGCAAAAGAACGTTTATTACTCGCT
GAAAAGCACGGAAAAGTTTGTCGCGATGATTCGGTTGAAGGACTTAAGTTTTATCCAAAT
TTATTTTTGACTGCAATAAGATGA
| Gene3D |
PH-like_dom_sf (IPR011993) - T[1-137] 1.6E-42 |
| ProSiteProfiles |
GLUE_dom (IPR021648) - T[1-138] 17.612 |
| PANTHER |
Vps36 (IPR037855) - T[11-384] 1.2E-133 |
| Pfam |
GLUE_dom (IPR021648) - T[15-87] 3.2E-12 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[186-300] 3.26E-8 - T[277-384] 3.13E-27 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[237-316] 1.6E-32 - T[317-385] 8.8E-28 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| VPS36_HUMAN | 51.804 % | 426 | 9.6E-149 |
