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TRANSCRIPT CARD

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  1. Region 'REG00000350'
  2. Region 'REG00000343'
  3. Transcript 'Harore.CG.MTP2014.S1...'
  4. Transcript 'KH2012:KH.C10.571.v1...'
  5. Transcript 'Moocul.CG.ELv1_2.S12...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S123721.g14492.01.t

Possible name(s)

CHN1; CHN2; RACGAP1

Location

S123721 [14,994 / 25,545]

Sequences

Amino acid sequence

Length: 635

>Moocul.CG.ELv1_2.S123721.g14492.01.p
MASMDAFAKLPLSGRLNELDYVEELTGQAGCELGRATLSLAICLEDLRKRGLIMEENLSE
LQMKYTKSEAEKNALTVKLKHARRQIEREIQHRQQVEQERDDMETQIMLVRDLLFNNSDT
NSCGLNEEQQKKLDFLNASRYMSPREGRKTVRKLERIDETGSFLSNYSDISFDYTEDDLD
ATQLRNGKRCTKRTRKAEQRAYMHDEATNNKKFKCESDEELLINVDGPATVSVEKLEKSF
HRPAAHQGRRRQSREHRRRSAGLTSESETGSSDLDNLWPSAGTTKPKSCLRNVNKTPTKL
TGKLHDMQIKPCVITKETCKPCGKRIQFGKKAVKCSDCRLVTHPECESQARQFSCDPTQR
SPSTPTSPRSRSPSRPTCLEDFIISTDTAQIPPLIYYAVQEIENRGLEEQGLYRIPGSVR
LVRELKEKFVRGKSIPDLTKVDEVHTLCSSVKEFLRETLPEPLLTFSLYQQFSEAANKDT
DAELYHCISELPQANRETLAYLMVHLQRVVDNSENCMSQEALSKAMGPSLVGYPNAEPSM
QQIQAAAGIQERVMSRLLSLPYDYYMTFIKDIENTDLKGPYTAMPTTMLGPIGVSPKKTP
SGSSLADRAKKYLHGTPFGRSGNKKGNYFPSPILK

Nucleotide sequence

Length: 2,293

>Moocul.CG.ELv1_2.S123721.g14492.01.t
TTCAGTTTCAGTTTGCTAACCATAATTGTTATACCGCTATCGAGCATTGAACTGTTGAAC
AACCAGACAACCAATGCGGTAGGCTACTGAACTTTACTACAAACAGAACCGAACTTCTGA
ATGGCGAGCATGGATGCATTTGCAAAACTTCCATTATCTGGCAGACTTAATGAACTGGAT
TACGTTGAAGAACTTACTGGGCAAGCAGGTTGTGAATTAGGAAGAGCCACTCTATCATTG
GCAATATGCCTGGAGGATCTACGAAAGAGAGGTTTAATAATGGAAGAAAACCTTAGCGAA
TTGCAAATGAAATATACAAAGTCGGAAGCGGAGAAGAATGCGCTAACTGTGAAACTGAAA
CACGCTCGTCGCCAAATTGAAAGAGAAATTCAACATCGACAACAAGTTGAACAGGAAAGA
GATGATATGGAAACACAAATAATGTTGGTTCGGGATTTATTGTTTAACAATTCTGATACA
AATTCCTGTGGGCTCAACGAAGAACAACAAAAGAAACTCGATTTCCTAAATGCAAGTCGG
TACATGTCTCCACGAGAGGGTCGTAAGACGGTTCGTAAATTGGAACGAATCGACGAAACT
GGTTCGTTCCTGTCCAATTACTCTGACATATCGTTTGATTATACCGAAGATGATCTCGAT
GCAACACAACTTCGAAACGGAAAACGATGCACCAAAAGAACACGAAAAGCTGAACAGCGA
GCTTACATGCATGATGAAGCAACCAATAACAAGAAGTTCAAATGTGAATCGGATGAAGAA
TTGCTGATTAATGTTGATGGTCCGGCTACAGTGAGCGTTGAGAAGTTGGAGAAGAGCTTC
CATCGTCCTGCAGCTCATCAAGGAAGAAGACGACAATCACGAGAACACAGAAGAAGAAGT
GCTGGATTGACATCAGAGTCGGAGACGGGCAGTAGTGACCTTGACAATCTATGGCCATCC
GCAGGAACCACAAAACCAAAATCATGCCTTCGTAATGTGAACAAAACACCAACCAAGTTA
ACAGGCAAACTTCATGACATGCAGATCAAACCATGCGTGATCACAAAGGAAACTTGTAAA
CCGTGTGGGAAGCGGATTCAGTTTGGCAAGAAGGCCGTGAAATGTTCCGATTGTCGATTG
GTGACACATCCTGAATGTGAATCACAAGCGAGACAATTTTCATGTGATCCTACGCAACGA
TCGCCATCTACACCAACAAGTCCACGGTCCCGTTCACCATCTCGACCAACATGTCTCGAA
GACTTCATCATTTCAACCGACACAGCGCAAATACCACCGTTGATTTATTACGCTGTGCAA
GAAATCGAAAACAGAGGACTAGAGGAACAAGGTTTATATCGCATCCCTGGCAGCGTACGT
CTCGTACGAGAACTGAAAGAGAAGTTTGTTCGTGGAAAATCGATTCCTGATCTCACGAAG
GTGGATGAAGTGCATACATTGTGTTCATCTGTCAAAGAATTCTTACGTGAAACTTTGCCC
GAACCTTTGCTTACGTTTTCACTTTACCAGCAGTTCAGTGAAGCTGCTAACAAGGATACT
GATGCGGAATTATACCATTGCATAAGTGAACTTCCACAAGCCAACCGTGAGACATTAGCA
TATTTAATGGTACACTTGCAACGTGTTGTGGACAACAGTGAGAACTGCATGTCACAAGAA
GCTCTCTCCAAAGCGATGGGTCCATCACTTGTCGGATATCCAAATGCTGAACCAAGCATG
CAGCAGATACAGGCAGCAGCTGGCATACAGGAACGTGTGATGTCACGTTTGTTGAGTCTT
CCATATGATTATTACATGACATTCATCAAGGACATTGAAAACACTGATCTTAAGGGTCCT
TATACAGCGATGCCAACTACTATGCTCGGACCAATCGGTGTGTCACCGAAGAAAACACCA
TCTGGAAGTTCGCTTGCTGATCGCGCAAAGAAATACTTGCATGGAACGCCATTTGGACGA
TCTGGAAACAAAAAAGGAAATTATTTTCCATCGCCGATATTAAAATAATCATCGCTCTGC
TGACTTCACAGCGACGCAGTATTACACGGAACATTTACAACTCTTCATTCTGCCAAGAGA
CAGCTAATACATTAACTTCAGACTTAGCTGCATCACACTGCATCTATATATTGTTATATT
TCTCGTTTGTTCGTATATCACTGCTACTAATATTAACATGTTTTAGTTACTGTATATTGC
CAACGTAATTTACTTGTATATAATATTTTCACAATGAATTATTTGTGCTTTTCCAAGTAG
GTTTTTATTATTC

InterProScan

ProSiteProfiles
PE/DAG-bd (IPR002219) - T[304-355] 8.844
ProSitePatterns
PE/DAG-bd (IPR002219) - T[305-355] .
Gene3D
Rho_GTPase_activation_prot (IPR008936) - T[373-572] 1.1E-52
ProSiteProfiles
RhoGAP_dom (IPR000198) - T[377-565] 34.13
SUPERFAMILY
Rho_GTPase_activation_prot (IPR008936) - T[388-559] 8.24E-36
SMART
RhoGAP_dom (IPR000198) - T[389-557] 3.9E-35
Pfam
RhoGAP_dom (IPR000198) - T[392-534] 1.5E-33

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RGAP1_HUMAN 36.589 % 315 5.17E-99
CHIO_HUMAN 28.136 % 95.5 8.35E-21
CHIN_HUMAN 29.435 % 98.6 7.09E-22