- Molecular Tool 'Harore_Zf-1_MO (Miyaoku 2018)' >
- Transcript 'KH2012:KH.C5.5.v1.R....' >
- Transcript 'KH2012:KH.L149.2.v8....' >
- Transcript 'Cisavi.CG.ENS81.R215...' >
- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S118709.g14048.01.t
Possible name(s)
POLR1C; POLR2C
Gene model
Location
S118709 [4,964 / 12,318]
Amino acid sequence
Length: 313
>Moocul.CG.ELv1_2.S118709.g14048.01.p
MKKYTEHKLEDGQNFRIEIKSAEDYEMEFDMIGVDVSIANAFRRIMLSEVPTMAFEKVYL
LNNTSIIQDDVLAHRLGLIPIKADPKMFQYKEENADATPEDTLKFELKVKCKKIPNAPKH
ATDINEIYNTKLYSKEIKWMPFGNQKDVFSEADISLVHDDILIAKMRPGQEIILEMDAVK
GIGKDHAKFSPVATASYRMLPKITLLKKITGDEAIKLQSCFSKGVIELFTNKHGETEARV
TNARNDSGSREVLRWPEFNDKVHLAKVLSVESTGSWKASEIVSESIKILMERCKFYLNEI
EELQSNDQDFNHV
Nucleotide sequence
Length: 1,014
>Moocul.CG.ELv1_2.S118709.g14048.01.t
ATGAAGAAATACACGGAACACAAGTTGGAAGATGGTCAGAATTTCCGAATCGAAATAAAG
AGTGCGGAAGATTATGAGATGGAATTTGACATGATTGGAGTTGATGTATCGATTGCAAAT
GCTTTTCGAAGGATCATGCTTTCGGAGGTTCCAACAATGGCATTTGAAAAAGTGTACTTA
CTAAACAACACAAGTATAATACAAGATGACGTTCTTGCCCACCGTCTCGGGTTGATTCCA
ATAAAAGCAGATCCAAAAATGTTTCAATATAAAGAAGAAAATGCAGATGCCACGCCTGAA
GATACGTTAAAATTTGAATTAAAGGTCAAATGTAAAAAAATACCGAATGCTCCCAAACAT
GCAACGGATATAAATGAAATATACAACACAAAATTATATTCTAAAGAAATTAAATGGATG
CCATTTGGAAACCAAAAAGATGTGTTTTCAGAAGCAGATATCAGTCTTGTTCATGATGAC
ATCCTCATTGCGAAAATGCGTCCAGGACAGGAAATAATACTGGAGATGGACGCTGTGAAA
GGAATAGGAAAAGACCATGCAAAGTTTTCTCCGGTTGCTACGGCGAGCTATAGAATGTTA
CCCAAAATCACTTTACTGAAGAAAATTACCGGAGATGAAGCCATTAAACTACAATCATGT
TTTTCAAAAGGAGTTATTGAACTTTTCACAAACAAACACGGAGAGACGGAAGCTCGCGTA
ACGAACGCTCGTAACGACAGTGGAAGCCGAGAGGTGTTACGATGGCCAGAGTTTAATGAT
AAAGTTCATTTGGCTAAAGTTCTTTCTGTTGAATCAACTGGATCGTGGAAGGCGAGTGAA
ATTGTGTCTGAATCAATAAAAATTCTCATGGAACGTTGCAAATTTTATTTAAATGAAATT
GAAGAACTACAATCTAATGATCAGGACTTTAATCATGTTTAATCGAATAAATATTTGCAA
TTTGTCTTTTTATTTATATACACGTATTTTAATAAGATGATGATTGGAGGAGGA
| PANTHER |
RNAPI/II_AC40 (IPR033901) - T[13-304] 9.0E-121 |
| SUPERFAMILY |
RBP11-like (IPR036603) - T[13-56] 2.16E-28 - T[218-303] 2.16E-28 |
| CDD |
RNAPI/II_AC40 (IPR033901) - T[15-299] 3.73655E-160 |
| SMART |
DNA-dir_RNA_pol_RpoA/D/Rpb3 (IPR011263) - T[26-299] 3.8E-96 |
| Pfam |
DNA-dir_RNA_pol_RpoA/D/Rpb3 (IPR011263) - T[28-293] 6.9E-19 |
| SUPERFAMILY |
RNApol_insert_sf (IPR036643) - T[51-191] 9.07E-37 |
| Gene3D |
RNApol_insert_sf (IPR036643) - T[52-187] 2.0E-108 |
| Pfam |
DNA-dir_RNA_pol_insert (IPR011262) - T[58-190] 1.1E-27 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RPAC1_HUMAN | 53.512 % | 327 | 1.31E-111 |
| RPB3_HUMAN | 31.606 % | 100 | 1.45E-24 |