- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S114743.g13666.01.t
Possible name(s)
COL1A1; COL1A2; COL24A1
Gene model
Location
S114743 [119,108 / 127,506]
Amino acid sequence
Length: 1,264
>Moocul.CG.ELv1_2.S114743.g13666.01.p
MGPRGSPGSNGPPGPQGYAGPPGETGDAGPAGPIGAMGPTGQTGKPGSNGEPGKPGTSGS
QGAPGQQGPRGFAGTPGIPGAKGHRGLSGSNGDKGEAGMDGAQGETGSTGESGDAGAMGP
RGMQGDRGRTGKPGPAGARGSDGTPGTVGPPGGQGINGPPGFPGTPGSKGDSGPRGVRGP
EGPQGQRGEPGSQGASGPPGNNGSPGVDGSAGAKGSTGSAGVAGAPGLSGPRGPPGPQGG
MGLAGPKGNQGVPGVNGYKGDQGPKGIQVRIGPRGASGPQGTAGPPGERGASGNRGFPGS
DGQPGIKGGAGDRGLPGRPGSKGSNGIQGRVGPAGEAGPRGLVGRPGNEGREGAQGLSGP
PGADGLPGSAGPTGQRGPPGPMGFTGLKGTTGLPGKLGEKGTDGPPGPRGENGKDGNVGS
PGPQGPQGVAGERGETGQPGSPGFQGAPGPQGASGEPGKPGNTGLPGEMGLQGESGQRGE
RGFLGPKGPTGPAGQSGPRGQDGNPGADGQKGSTGPTGSAGETGPPGSQGPVGERGRPGA
QGGKGDRGDLGPPGEEGATGNDGPRGLTGPPGPVGPVGVQGDKGDAGRLGEPGPQGPRGT
TGDRGDAGPPGGPGFTGQPGNDGQPGKKGDSGARGMKGQTGSPGSIGPAGQPGPNGDAGV
QGPKGSRGSSGTPGTRGFPGGPGLPGSPGDQGSIGPQGVQGPSGIGGSKGSRGDQGLPGS
QGDPGPQGTEGAIGSRGPPGTPGNDGKAGPLGAIGIPGNRGQSGLPGPQGLPGAGGPKGA
QGEGGKQGPPGRSGERGSPGDIGPQGAMGPPGEPGLEGEPGIIGPPGRDGSSGNKGSRGE
SGLQGAPGGPGQPGQPGPMGVEGKSGSRGEPGPSGMQGTPGPEGQRGIPGPDGKRGDKGD
EGSYGPSGPKGHQGFRGLTGLPGPPGKEGVGGKQGAMGPAGLRGATGKRGQSGATGKSGS
PGVPGAQGFRGGDGEDGLPGPSGPPGPPGPPGPPGDMSPYPYPPPNWNKGPTLFNDQTSN
DDANVVSRDNEVLMALKDLGSEVRTIKAPTGSNRKAPARSCRDIYLAAKTNGEEITVKNG
LRWVDPNLGCASDAIEVECRFDTMETCVYPTNAKIGMTSVSSNQYFSEMANGRRMTYDPA
LESRVQHADYGSQLTFLRILHESASQNVTVYCNNLPAYYDSYSGSYDSAVKFKSTGNIEI
TAEGSNHYRVLEDGCMNSPSDGETVFQYKTKLVGRMPLVDLKVGFNEERGQQSFAAKFGP
VCFK
Nucleotide sequence
Length: 5,462
>Moocul.CG.ELv1_2.S114743.g13666.01.t
GTAACCAGGCACGATTCCCAGCTGAGCTAAATAAGCGAATGCAGACGTTTGGTTCAGCCA
CAGCCAACCAGGAGACCCTACCGAAAGCAGGTCTCGTTTGATTGGTTGTACTTAGCCTTA
AAACCGTGTACTTTGTTTAGAAGTGTAGGGTTTATAAGAGTCTAGAAAATTAGAGCTTAA
AACCCAACACGGGGAGCGGACGCTTTGCATTGTCTGCGTCAGCCCTCTGAGAGGACGATC
GGAATATACGTGTTAGCTTCGTATATTTCAAAACAATGAATATGCGAGCTTATGCGCTAC
TGTTGGCCTGCTGGGTCTCCGTGGCGTATGCACAGAATAAACCATGTACGCAAGATGGCG
CCATATATCAGGCTGGAGAGGTTTTTAAGTCAGACAAATGTACCGTGTGCTTATGCGACA
ATGGGGTGGTTACATGCGACACTATAACATGCGCTGTACTAACATGTGAGAAACAGTATA
CACCTGAAAAGGAATGCTGTCCTAAGTGCCTTAGACAAAGGCATAAAAGGACAAAAGGGT
GAGCCTGGCAGCATCCCGGATTTAGCCGGCACGGGACCATCGGGACCTCCCGGAATTCCT
GGATTGGATGGTGATCCTGGACCTGTAGGACCTGATGGACCGGAAGGACCACAGGGTGAA
AGAGGACCACGAGGAGATAATGGACGAAATGGACAACCAGGACCACCCGGTCCTCCTGGA
CCTCCAGGACCAGGAAGCGAATCGAGTGCATCGGGATTTTCAGGTCAAAAAGGGCCTTCC
GGTATCGTTACAGGCTCTCCTGGGCCGATGGGACCGAGAGGTTCCCCTGGTTCAAATGGA
CCACCGGGTCCACAAGGATATGCTGGCCCACCAGGCGAAACTGGAGATGCGGGTCCAGCG
GGACCAATAGGAGCAATGGGACCTACAGGGCAAACTGGAAAACCAGGCTCTAATGGCGAA
CCAGGAAAGCCAGGAACATCTGGATCACAAGGTGCTCCAGGACAACAGGGACCAAGGGGA
TTCGCTGGTACACCAGGTATACCCGGAGCTAAAGGACACAGGGGCCTGAGTGGTTCAAAC
GGAGACAAAGGTGAGGCTGGAATGGATGGCGCACAAGGAGAGACCGGTTCCACCGGAGAA
TCTGGCGATGCAGGTGCTATGGGGCCGAGAGGTATGCAAGGAGACCGCGGTCGCACTGGA
AAGCCGGGGCCTGCGGGTGCACGTGGATCTGATGGTACACCCGGTACAGTTGGACCTCCC
GGTGGTCAAGGAATTAATGGACCACCAGGCTTCCCAGGAACTCCGGGAAGCAAGGGTGAC
TCCGGTCCACGTGGTGTAAGAGGACCAGAGGGCCCACAGGGACAAAGGGGTGAACCTGGT
TCTCAAGGAGCATCGGGCCCTCCTGGAAACAACGGATCTCCTGGAGTTGATGGATCTGCA
GGTGCCAAAGGTTCGACCGGATCTGCAGGTGTGGCAGGAGCGCCCGGATTATCTGGACCC
AGAGGTCCCCCGGGTCCGCAAGGAGGTATGGGTCTTGCTGGACCAAAAGGAAACCAGGGT
GTACCTGGGGTTAATGGATATAAAGGAGATCAAGGACCTAAGGGTATTCAGGTGAGAATT
GGGCCGAGAGGAGCATCAGGTCCGCAAGGCACAGCAGGACCACCTGGCGAAAGGGGAGCT
TCTGGAAACCGAGGTTTCCCAGGGTCTGATGGTCAACCTGGGATTAAAGGCGGAGCTGGT
GATAGAGGCTTGCCAGGGAGACCAGGTAGTAAAGGAAGCAATGGAATCCAAGGAAGAGTC
GGGCCTGCTGGTGAAGCAGGACCTAGGGGTTTGGTGGGACGGCCTGGAAATGAAGGACGT
GAAGGTGCACAGGGACTTTCTGGACCACCTGGTGCTGATGGCCTACCAGGCAGTGCTGGT
CCAACAGGACAGCGAGGGCCTCCAGGACCAATGGGTTTCACTGGACTTAAGGGAACAACG
GGCTTACCAGGAAAACTTGGCGAAAAAGGAACCGATGGACCACCAGGACCTCGAGGAGAA
AATGGAAAAGACGGAAATGTCGGATCCCCAGGACCCCAGGGTCCACAAGGTGTGGCTGGC
GAAAGAGGAGAGACCGGTCAACCCGGTAGTCCAGGATTCCAAGGGGCACCTGGTCCACAG
GGAGCATCCGGAGAACCTGGGAAACCAGGAAATACAGGGTTGCCTGGTGAAATGGGACTT
CAAGGAGAGTCCGGCCAAAGAGGTGAGCGTGGATTCCTTGGTCCCAAAGGGCCAACAGGA
CCAGCTGGACAATCAGGTCCAAGAGGACAAGATGGAAATCCAGGCGCCGATGGACAAAAG
GGATCAACAGGCCCCACGGGTTCAGCTGGTGAAACTGGACCACCAGGATCGCAAGGACCC
GTTGGCGAAAGAGGACGACCAGGCGCACAAGGAGGCAAAGGAGACCGTGGAGACCTTGGT
CCACCAGGCGAAGAAGGTGCTACTGGAAATGATGGACCACGTGGTCTTACTGGACCACCA
GGACCGGTTGGACCAGTTGGTGTGCAAGGAGACAAAGGAGATGCTGGTAGATTAGGAGAG
CCAGGACCACAAGGTCCGCGAGGAACCACAGGTGATAGAGGCGATGCCGGACCACCTGGA
GGACCGGGATTTACTGGTCAGCCCGGAAACGATGGACAACCTGGAAAGAAGGGAGATTCT
GGCGCAAGAGGCATGAAAGGCCAAACTGGTTCCCCTGGAAGCATTGGACCCGCAGGACAA
CCGGGACCAAATGGAGACGCTGGTGTTCAAGGACCTAAAGGTAGCAGGGGATCATCCGGA
ACACCAGGAACGAGAGGTTTTCCGGGAGGACCAGGTTTACCTGGAAGCCCTGGAGATCAA
GGTTCAATAGGGCCTCAAGGAGTACAAGGTCCATCTGGTATTGGTGGGTCAAAGGGATCG
CGTGGTGACCAAGGCCTACCAGGATCGCAAGGTGACCCAGGACCGCAGGGTACAGAAGGT
GCAATCGGTAGCCGGGGACCACCCGGTACACCAGGAAACGATGGAAAGGCCGGACCACTT
GGTGCAATCGGTATTCCAGGAAATAGAGGTCAATCTGGTTTGCCTGGACCACAAGGTTTA
CCAGGTGCTGGTGGACCAAAAGGTGCCCAAGGTGAAGGAGGAAAGCAAGGTCCACCTGGT
AGGTCCGGAGAAAGAGGGTCACCTGGTGACATTGGTCCCCAAGGTGCCATGGGTCCGCCT
GGTGAACCTGGTTTGGAAGGAGAACCAGGCATCATTGGTCCACCCGGACGTGACGGATCT
AGCGGAAATAAGGGATCAAGAGGAGAATCCGGCTTACAAGGGGCACCAGGTGGACCAGGA
CAGCCTGGACAACCAGGTCCAATGGGGGTTGAAGGAAAGAGTGGGTCTAGAGGTGAACCT
GGGCCGTCAGGTATGCAAGGAACCCCTGGACCTGAAGGTCAAAGAGGAATTCCTGGTCCT
GATGGAAAACGAGGCGACAAAGGAGATGAAGGATCATACGGTCCATCCGGTCCCAAGGGA
CATCAAGGTTTCAGAGGTTTAACTGGTTTACCCGGCCCACCTGGTAAAGAAGGTGTAGGA
GGAAAACAAGGCGCGATGGGACCAGCGGGACTTCGGGGTGCAACTGGAAAACGTGGCCAA
TCAGGCGCTACTGGCAAGTCCGGCTCACCTGGTGTTCCAGGTGCGCAAGGTTTCCGTGGA
GGTGATGGTGAAGATGGTCTTCCAGGCCCCTCTGGACCTCCAGGACCACCCGGCCCGCCA
GGACCACCAGGAGATATGTCTCCTTATCCATACCCACCACCAAATTGGAACAAGGGACCA
ACTCTGTTCAATGACCAAACTTCCAACGATGATGCTAATGTCGTGTCTCGTGATAATGAA
GTTTTGATGGCGCTTAAAGATTTAGGCAGTGAAGTCCGAACAATTAAGGCTCCGACAGGA
TCTAACAGAAAAGCTCCAGCTCGAAGTTGTCGGGATATTTATTTGGCAGCTAAAACAAAT
GGAGAAGAAATTACTGTCAAAAACGGACTTCGATGGGTGGATCCAAATCTTGGATGTGCA
TCGGATGCCATTGAAGTTGAATGCAGATTCGACACAATGGAAACATGTGTATACCCAACT
AATGCAAAGATCGGTATGACTTCTGTTTCATCCAACCAATACTTCTCTGAGATGGCTAAT
GGTCGCCGAATGACCTATGACCCAGCATTGGAGTCAAGAGTGCAACATGCAGACTACGGA
AGTCAACTTACATTCCTCCGTATTTTGCATGAGAGTGCGAGCCAGAATGTGACAGTTTAC
TGCAATAATCTTCCCGCATACTATGATAGTTATTCCGGTAGCTACGACAGCGCGGTGAAA
TTCAAATCGACAGGAAATATTGAAATCACAGCGGAAGGAAGCAATCATTACCGAGTCTTG
GAAGATGGCTGCATGAACAGTCCAAGTGATGGTGAAACTGTATTCCAATACAAGACTAAG
TTGGTAGGACGCATGCCTTTGGTGGATCTTAAAGTAGGATTCAATGAGGAGCGCGGCCAA
CAAAGCTTTGCAGCAAAATTCGGTCCGGTGTGCTTCAAATAGAATACACCAACAACGTTA
TACCTTGCCTGACGGACAACCGGTTACACAACGACTTTGATTAAGGAATTTGCGTGGATT
TATGAACTGACGACGACGACAATTAATGACTTTGCTTTGTAAAACTTTTATTATTTTATT
TGACGACAAATCAGCATATTATATTATTCTACTATTACCTTCGCCCATTTCATTACTGAG
CATTTTTTGTGAATTTTACTGTACTTGGCAACTATTTGCCAACCTATTTTTTTTATTATT
TTTTTAATTGCCATGTTTGCCTTTGTTTATTATTCCATTTATTCCTCAAAAGAGGTGTCC
ATTTACAACCTATCAGATGCTTTTTCAAGCTTGCAATTTGTCACTGTATTAGGTAACTCT
AAATTTTAGGCAATTTTTTCGCCGTGATTTTTATGTTTTGTCGTGTTTTTAATGTTGTGT
GTATATATCTCCATCGACCGCATCAGTATTAGCACTAGACATGGGCCTTTTGGCAGCTTG
TCAGTGCGTTGTTCAAACTAACATAATATTTTTGTTAATTGTCTTTGTATTATTCACACG
GTGTAAAATTTCATGCCACGCAGAACCGACCACTACATAGTTCTTTAAAAGGTATTTCAT
GTTAACCAGCACAAACACGAAACGTCTTTTAGATTTCTATGTGTGGTTCTGCATCAATGC
ACCCTGTGCCTGGTTTTGAAATGTCTGTAAAATACAGTGCATATTTCTTGCTTTGGAAAA
CTTTTTAAGAACTTAATGATTTGCCAAATCTTCGTCAACACTAAGTGCCATTTTTACATT
ATTGTTTTTTTCCTTATTATTAGCTTAAATTGAATAAATATTGGCAACTGCTGCCTACAA
AA
| Pfam |
Collagen (IPR008160) - T[2-60] 9.3E-10 - T[53-111] 4.5E-8 |
| Pfam |
Fib_collagen_C (IPR000885) - T[1029-1263] 6.6E-61 |
| SMART |
Fib_collagen_C (IPR000885) - T[1029-1264] 2.4E-54 |
| ProSiteProfiles |
Fib_collagen_C (IPR000885) - T[1030-1264] 56.235 |
| ProDom |
Fib_collagen_C (IPR000885) - T[1154-1263] 1.0E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COOA1_HUMAN | 36.301 % | 425 | 2.57E-125 |
| CO1A2_HUMAN | 47.233 % | 543 | 6.01E-171 |
| CO1A1_HUMAN | 51.978 % | 517 | 2.55E-160 |