- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S113653.g12985.01.t
Possible name(s)
CDH11; CDH18; CDH7
Gene model
Location
S113653 [12,793 / 16,927]
Amino acid sequence
Length: 918
>Moocul.CG.ELv1_2.S113653.g12985.01.p
MLTLLCKWIFLTLAIRGQTTIRNVDIKSDIQVGEIVTIFPPSYGNASFPSKSNIESYFEI
FKMKMSEKTVTGLRLKKSVTDTKLREICPLLLYTNTTTRESATAYLAFKIVKNEPSKFSS
SKEANAAAEVAMQDLRPMATKAHRRTKRWDWKEFDVTEEMEPPQLVFKLKSTFDNRTGSV
LYFMEGEGAGSTFKITKENGRVETLVKLDREEKSTYQLKIYATDLHHKIIEGPSTVIVKV
LDMNDQKPVFERPHYYANVEERAMIGTDIIPVKATDKDDNTRPFGQLRYSIVGGSNLFAI
HPKTGMVRTKVNNLDRELKDEYKLVIEARDTPNQILGFSTTTNITIHVTDVNDNPPKFTL
NSYHELAMENLVIGEEISRLTVTDKDLLENKATVFSLEGEDAKYFSVHSTGNMAIISVAK
KLDYESARSHQYKFKVIGKNLYPDDRFDYINLIGSTDMVVDLIDVNEPPEFKESEFNFHV
REDAKVGTNIDIPTANDPEGDAFVYQLLNHKKMFTIDTMTGMITLKSKLDRETISSYDLV
VQAGLAKENTAKVVVTIDDVNDNPPEPLEDNLEVILCIGEKEKRQVLQPPIEMKDRDDPK
TGGKPFHFFPTKNNNYRVHFDLVDNGDSTASLRTKHNNFRFSEKANYQVPVVVSDSGSPK
QNATYIVMVRICYCSADIKDRCGAAPMAAGMRVDILVAILVTVAFLLFIVIIILLVRRRR
QRAVAGSNQKLSLYQEEDDIRENVITYNEEGGGEEDTAAYDITALSLAGTSPRESVTPIK
MKMKSPVRPHRPESCDMHSFIESFKGREDGDDQKMPFDSIQVYSYEGNGSLAGSLSSIAS
CGTDDGDQVYDHVREWGPRFTKLADIYDNAYEESDEDEDMIRTRPELPYFNYTFSSQGSV
RRGSSRQKPRLVRTATPL
Nucleotide sequence
Length: 3,116
>Moocul.CG.ELv1_2.S113653.g12985.01.t
TGTTTTTAGAGTTCGTGTAGTGTTGAAAGCAATCTTGTAGAAAGATGCTAACGTTATTAT
GCAAATGGATATTTCTTACCCTGGCCATCCGAGGTCAAACTACAATCAGAAATGTGGACA
TCAAAAGCGACATACAAGTCGGGGAAATTGTTACTATTTTCCCTCCAAGTTACGGCAATG
CAAGTTTTCCATCAAAATCGAACATTGAAAGTTACTTCGAAATCTTCAAAATGAAAATGT
CAGAAAAGACAGTTACCGGACTACGTTTGAAGAAGTCAGTTACTGACACGAAACTGCGAG
AGATATGTCCGCTTCTGCTGTATACAAATACAACTACACGAGAATCTGCCACTGCATATC
TTGCCTTCAAGATTGTCAAAAATGAACCAAGCAAATTTTCATCATCAAAGGAAGCAAATG
CTGCCGCCGAAGTTGCAATGCAAGACCTTCGACCAATGGCAACGAAAGCACATAGAAGAA
CGAAGAGATGGGACTGGAAAGAATTTGATGTAACGGAAGAAATGGAACCACCGCAGCTGG
TTTTCAAGCTTAAATCCACCTTCGACAATCGTACCGGAAGTGTACTATACTTTATGGAAG
GTGAAGGTGCTGGCTCAACATTTAAAATTACCAAAGAAAATGGTCGTGTGGAAACCTTGG
TCAAACTTGATCGGGAAGAGAAGAGCACGTATCAGTTAAAGATTTACGCCACTGACTTGC
ATCATAAAATAATTGAAGGTCCAAGCACAGTTATCGTCAAAGTTCTGGACATGAATGATC
AAAAACCAGTTTTTGAACGACCCCATTACTATGCAAATGTCGAAGAAAGAGCAATGATTG
GTACGGATATTATTCCCGTAAAAGCGACGGACAAAGACGACAACACCCGCCCATTTGGTC
AGCTTCGTTACAGTATTGTCGGAGGGTCAAATTTGTTTGCTATTCACCCAAAAACAGGCA
TGGTTCGTACGAAAGTGAATAACCTTGACCGAGAACTAAAGGACGAATACAAACTAGTGA
TTGAGGCACGTGATACTCCTAACCAAATCCTTGGGTTTTCTACGACGACAAATATCACAA
TCCATGTAACTGACGTTAATGACAACCCACCAAAATTCACGTTAAATTCTTACCACGAGT
TGGCGATGGAGAATTTAGTAATTGGAGAAGAAATTTCCCGCCTGACGGTTACCGATAAAG
ACCTTCTAGAAAACAAAGCAACTGTGTTTAGTCTTGAAGGGGAGGACGCGAAATACTTCA
GTGTTCATTCAACCGGAAACATGGCAATTATTAGCGTCGCAAAGAAATTGGACTACGAAA
GCGCGCGTTCACACCAGTACAAGTTTAAAGTTATCGGCAAGAATCTTTACCCTGATGATC
GTTTTGATTACATCAATCTTATTGGAAGCACCGACATGGTAGTGGATTTGATCGACGTTA
ACGAACCTCCCGAGTTCAAAGAATCCGAATTCAACTTTCATGTTCGTGAAGATGCAAAAG
TTGGCACCAACATCGACATACCAACAGCAAATGACCCTGAAGGAGACGCATTTGTATATC
AACTGTTAAATCACAAAAAGATGTTTACGATTGACACTATGACTGGGATGATCACATTAA
AATCCAAACTTGACCGAGAAACAATAAGTTCGTACGATTTGGTCGTACAGGCTGGATTGG
CGAAAGAGAACACAGCGAAAGTTGTCGTAACGATCGACGACGTTAACGATAACCCTCCGG
AACCTTTGGAAGACAATTTGGAAGTGATTCTGTGTATCGGAGAGAAGGAAAAACGACAAG
TGTTGCAACCTCCGATTGAAATGAAGGACCGCGATGACCCGAAGACTGGAGGAAAACCAT
TCCACTTTTTCCCGACTAAGAATAACAATTACAGAGTTCATTTTGATTTGGTCGACAATG
GAGACAGCACAGCATCTCTCCGAACAAAACACAACAACTTCAGATTTTCTGAGAAGGCGA
ATTACCAGGTTCCGGTCGTGGTCAGTGACAGCGGATCGCCAAAACAAAATGCCACTTACA
TCGTAATGGTCCGTATATGCTACTGTTCCGCTGATATCAAAGATCGATGTGGCGCCGCTC
CAATGGCAGCTGGAATGCGAGTCGATATTTTAGTGGCCATATTAGTCACTGTTGCCTTCT
TACTGTTTATTGTGATCATCATTTTGCTTGTGAGAAGACGAAGACAACGAGCGGTTGCCG
GTAGTAACCAGAAGTTGAGTTTGTATCAAGAGGAAGATGACATCCGTGAAAATGTGATTA
CGTACAATGAAGAAGGAGGCGGAGAGGAAGATACTGCTGCTTATGACATCACAGCGCTGT
CGCTGGCGGGAACGTCACCACGTGAATCAGTGACACCCATAAAAATGAAGATGAAGTCTC
CAGTTCGTCCACATCGACCTGAAAGTTGCGACATGCATTCGTTTATCGAAAGTTTCAAAG
GAAGGGAGGACGGAGATGATCAAAAGATGCCTTTCGATTCCATCCAGGTATACTCATATG
AGGGCAATGGGTCATTGGCAGGGTCACTGAGTTCAATCGCTTCATGTGGGACGGACGATG
GCGACCAGGTGTATGATCACGTGAGGGAATGGGGACCACGATTCACAAAGTTAGCAGATA
TTTATGACAATGCTTACGAAGAAAGCGATGAAGATGAAGACATGATCCGTACACGTCCGG
AACTTCCGTACTTCAATTACACGTTTTCATCGCAAGGATCTGTTCGACGAGGAAGTTCTC
GACAAAAACCACGCCTTGTTCGCACAGCCACGCCCCTTTAATTACAACAGACCAAACAAC
CAATACCTATTCTTTTTTTTTATATTTATTTTACCTTTTTTGACCTGCAGGGTTTGATTA
TGATTTTAATTTGATATTTTTCGTTCCACCTTTTTGACCAAATCGTGTGTGTTTTTTTGC
TGTGAATTTTTAATCATGCTGCTTTTCCGTGTGTTTATGCCACGTACCTTTCTACCACGA
CTTCTTCAAGCTGATTTTAGCTTTCATTCGTTTTATGTGTGCATTTGTGCTTGCTTTTTA
TACGCAATATTCGTATACCTTTAAATTTTTCAATACAATGTAAAAATATTGCTTGA
| Pfam |
Cadherin (IPR002126) - T[156-241] 5.5E-10 - T[255-349] 8.8E-17 - T[367-441] 2.0E-8 - T[476-557] 2.1E-11 |
| SMART |
Cadherin (IPR002126) - T[170-248] 8.1E-12 - T[272-356] 3.0E-25 - T[380-470] 8.4E-6 - T[493-565] 9.9E-16 |
| SUPERFAMILY |
Cadherin-like (IPR015919) - T[177-250] 3.71E-13 - T[238-363] 1.11E-25 - T[346-445] 2.14E-14 - T[460-574] 7.57E-19 - T[560-672] 3.28E-9 |
| PRINTS |
Cadherin (IPR002126) - T[191-210] 1.2E-33 - T[250-279] 1.2E-33 - T[321-333] 1.2E-33 - T[337-356] 1.2E-33 - T[469-482] 1.2E-33 - T[519-545] 1.2E-33 - T[549-566] 1.2E-33 |
| ProSitePatterns |
Cadherin_CS (IPR020894) - T[346-356] . - T[555-565] . |
| Pfam |
Cadherin_cytoplasmic-dom (IPR000233) - T[729-869] 8.1E-43 |
| Gene3D |
Catenin_binding_dom_sf (IPR027397) - T[776-873] 1.0E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CADH7_HUMAN | 35.613 % | 405 | 2.98E-128 |
| CAD11_HUMAN | 35.942 % | 400 | 1.57E-126 |
| CAD18_HUMAN | 34.601 % | 411 | 1.07E-130 |
