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- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S113389.g12858.01.t
Possible name(s)
PARN; PNLDC1
Gene model
Location
S113389 [3,073 / 8,010]
Amino acid sequence
Length: 713
>Moocul.CG.ELv1_2.S113389.g12858.01.p
MEITRNNFKETLQIVAQAIEDCTFLSLDTEFSGLTNGTVSVTNYDSPEDRYQKIRSNTGS
FTILQFGLCTFKLDEKSSKYSAKAFNFYIFPFRSNCPGVPDRIFSCQSSSIDFLSAQNFD
FNKVFREGIPYLKPPEEALCRSSLEERHLQRTSPRKSLDPNVNGASPCSSPTPISDQRTK
DFVDSVCKKIEDFLKDSNGGEVLKLDPCNSYLRKILYETIPKRFNDSVFLESRTDEKRHR
YLVVVRACGEAALKKKRDEAKARDDALLEDAIGFSKVMQLITGSQKLILGHNCLFDIVYS
VQQFISNLPPTLEEFKSLVSCVFPRVIDTKLMGSMLPFKENVPSTALGDMYARLQTEPFG
LPEIELPEEYSSVTVTDNYLHEAGYDAFITGASFLGMLKFLHKIGKSKSSTVTLKKDYIS
PYCNKLFLMRSPDIPYLNLAGADLSPTRSHVFHVKFPAVWKTNDIRQMFAPVTGGVQISW
INDTQCFVGLYNKSQVGLVRKIITQNRSGTAVIKTYDEYQKELSTPPQHFNNNRPFSQNK
VWLSTNSAPKRSYSSAVSHNLQPSASTSNPLAKKLSPAKNITETPSTSTEKVTEDAEDQL
TELREVNSNTEVKSKVTSDRKRHGNETESSNGNDEVDEPKIKRQRSQLKVKIIDNLLPKT
ALLKWLPNLLCDDLSNVAECLNKDGVKQGAAATGIAVDGSSKANNGFEVPETW
Nucleotide sequence
Length: 2,332
>Moocul.CG.ELv1_2.S113389.g12858.01.t
TTTTATTAGGTGTTAGTAGGCTACATCTTCCTCTTCTGCTCTTTACTCATTGCTAATTAG
CTTTGCCCAACATTTAAATAATATGGAGATAACTCGAAACAACTTCAAGGAGACGCTTCA
AATTGTTGCGCAGGCCATTGAAGACTGCACATTTCTTTCATTGGATACTGAATTTTCTGG
TCTAACAAATGGGACGGTCAGTGTAACCAACTATGATTCACCTGAGGACAGATATCAAAA
GATAAGAAGTAATACTGGAAGTTTCACAATTCTTCAATTTGGTCTTTGCACTTTCAAGTT
GGATGAAAAATCTTCAAAATATTCGGCAAAAGCTTTCAACTTTTACATATTTCCATTTCG
TTCTAATTGTCCAGGTGTTCCAGACAGAATATTTTCCTGCCAAAGTTCCAGCATTGACTT
TTTATCTGCTCAAAACTTCGACTTCAATAAAGTCTTTCGTGAGGGAATTCCATATCTAAA
ACCTCCTGAAGAAGCTCTTTGCCGCTCATCATTAGAAGAAAGACATTTACAAAGAACTTC
ACCAAGGAAAAGTTTGGATCCTAACGTCAACGGAGCAAGTCCTTGCAGTAGTCCAACGCC
CATATCGGACCAACGCACAAAAGATTTTGTTGATTCTGTTTGCAAAAAAATTGAAGATTT
TTTAAAGGATTCCAATGGAGGAGAAGTTCTTAAACTTGATCCATGCAATAGTTACTTGCG
GAAAATTTTATATGAAACAATACCGAAAAGATTTAATGATTCAGTATTCCTCGAATCTCG
GACGGACGAGAAGAGGCATCGATATTTGGTGGTTGTTCGAGCGTGTGGTGAGGCAGCATT
GAAGAAGAAGCGAGATGAAGCAAAAGCAAGAGATGATGCGCTACTGGAAGATGCAATTGG
ATTTTCAAAGGTTATGCAGCTGATAACCGGTTCACAAAAGCTTATCCTTGGGCACAATTG
TCTGTTTGATATCGTTTATAGCGTACAACAATTCATCAGTAACCTTCCACCAACACTTGA
AGAATTTAAATCTCTCGTTAGTTGTGTCTTTCCGCGAGTGATTGACACAAAGTTGATGGG
AAGCATGTTGCCTTTTAAAGAAAATGTTCCATCAACAGCTCTCGGAGACATGTACGCTCG
TCTTCAAACGGAACCTTTCGGTCTTCCAGAAATAGAACTTCCAGAAGAATATTCTTCTGT
AACTGTTACTGACAATTACCTTCATGAAGCTGGTTATGATGCTTTCATAACCGGTGCGTC
CTTTCTTGGTATGCTAAAATTTCTCCATAAAATTGGAAAATCAAAATCATCCACTGTGAC
TCTAAAAAAAGATTACATTTCACCGTATTGCAATAAGTTATTTTTAATGCGAAGCCCTGA
CATTCCCTACCTCAACTTAGCCGGAGCAGATTTGTCTCCGACACGAAGTCATGTGTTTCA
TGTTAAGTTCCCTGCTGTTTGGAAAACCAACGACATCCGACAAATGTTTGCACCCGTAAC
AGGAGGTGTTCAAATATCGTGGATAAATGATACACAATGTTTTGTTGGTCTTTATAACAA
GAGTCAGGTTGGGTTGGTACGTAAAATCATAACACAGAATCGCAGTGGAACTGCAGTTAT
AAAAACGTATGATGAGTATCAGAAGGAACTGTCCACACCACCGCAGCATTTCAACAACAA
CCGACCATTTTCACAGAATAAAGTTTGGTTATCCACCAACTCTGCCCCTAAAAGATCATA
CTCAAGCGCTGTCAGTCATAACTTGCAACCATCCGCTTCAACATCGAATCCACTTGCCAA
AAAATTGTCGCCAGCAAAAAATATAACCGAAACACCGTCTACCTCAACTGAAAAGGTCAC
TGAAGATGCAGAGGATCAATTAACTGAACTGCGTGAAGTAAATAGCAATACTGAAGTGAA
ATCGAAAGTCACGTCGGACCGTAAACGACACGGAAATGAAACTGAAAGTAGCAATGGGAA
TGATGAAGTTGACGAACCAAAAATAAAACGACAACGTTCTCAGCTCAAGGTCAAAATTAT
TGACAATCTCTTGCCAAAAACAGCACTGCTAAAATGGTTGCCTAATTTATTATGTGATGA
TTTGTCAAACGTAGCGGAGTGCTTGAACAAAGATGGTGTTAAACAAGGAGCTGCTGCAAC
TGGTATCGCTGTCGATGGATCTTCAAAAGCTAATAATGGCTTTGAGGTTCCTGAAACCTG
GTAATCATTAAAAAATCATATATTTTCCAAACAAGTTCACCTTTCCCTACCTTTATAAAT
GATTATTTTTTTTCTAGTCTATAAAATAAACAAACCCGTGTTCCTGTGCATA
| Gene3D |
RNaseH_sf (IPR036397) - T[1-155] 1.7E-47 - T[246-440] 8.9E-58 |
| SUPERFAMILY |
RNaseH-like_sf (IPR012337) - T[1-132] 3.04E-60 - T[270-402] 3.04E-60 |
| Pfam |
RNase_CAF1 (IPR006941) - T[3-394] 2.9E-84 |
| Gene3D |
R3H_dom_sf (IPR036867) - T[156-245] 1.6E-20 |
| SUPERFAMILY |
R3H_dom_sf (IPR036867) - T[178-248] 2.49E-16 |
| ProSiteProfiles |
R3H_dom (IPR001374) - T[180-248] 9.726 |
| Pfam |
R3H_dom (IPR001374) - T[182-246] 2.0E-6 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[435-500] 6.54E-5 |
| Pfam |
PolyA-riboNase_RNA_binding (IPR014789) - T[441-521] 6.2E-22 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[441-532] 1.1E-23 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PARN_HUMAN | 43.667 % | 437 | 7.65E-145 |
| PNDC1_HUMAN | 25.785 % | 143 | 2.63E-36 |