- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S112899.g12640.01.t
Possible name(s)
NR5A2; NR6A1; RXRA
Gene model
Location
S112899 [60,426 / 69,907]
Amino acid sequence
Length: 638
>Moocul.CG.ELv1_2.S112899.g12640.01.p
MSLDLSLRRMDNGMTLADHAQALRNASAALSKWSPTLRQSANSGSPPYHRNNIKSPSISH
QGIVPFQSYGENAIKMPVLPLMHHYNPASLSAYYRLPSDDLSQQNSVKEDGKEAKSCLIC
GDRATGLHYGIISCEGCKGFFKRSICNKRVYRCTRSKNCVMSRKQRNRCQYCRLLKCLQM
GMNRKAIREDGMPGGRNKSIGPVQISEDEIDRIMTGKEFEDELMQSQAQFHDGTKGGSPN
TPTQQYPHGYFGGNGNHRSDWSPVPGLAPNAQLSLAAMNKHMHPVTSASSPINMRYTNLS
RDQDSFTSYPSHLPQFNPFMQQVRINHSPESAAELSSSALVEQLLQAEDMSDLQSLSTSK
LHSKIQINKDDIFCLLCTVADDMLYRQIVWVKKLPFFEQISIKDHTTLLSTTWAEIILLA
ALCIHEHQLFGDLTDITTRYLPDPDELSRFSDYEMVVLERITNLYQKLSQLKVDKEEYVI
MKVINFLNQDIKGLQEVEQIEEINKRYWYACQRYTELKAMEKNMESGSGGSGRFRDLMLC
LPEIRHVAGKMLNTDIAKLPLLFKAILHTCKLQRIQSGQVAPNVSTNNNNNMATPSTTTS
SNVDATEGMKEEGLSSNDVEAASSNSPSNDSYYGDERK
Nucleotide sequence
Length: 3,385
>Moocul.CG.ELv1_2.S112899.g12640.01.t
TTATTTTTAATTTTAGATCTTTTGTAAATTTTTGTGTTATTTATATTTATTTAATTGGTC
GATCACTGGTGCCGCAATGAGTTTGGATTTAAGTCTACGAAGAATGGACAACGGAATGAC
CTTAGCAGATCATGCCCAAGCTTTACGGAATGCAAGTGCTGCATTGTCTAAATGGTCACC
GACACTTCGTCAAAGCGCAAATTCTGGTTCTCCGCCATACCACAGAAATAATATAAAATC
TCCGTCCATTTCCCACCAAGGTATTGTTCCTTTCCAGTCATACGGAGAGAATGCAATTAA
AATGCCCGTCTTGCCGCTGATGCACCACTACAATCCCGCCTCACTGTCGGCGTATTACCG
ACTCCCGTCCGACGATTTATCGCAACAAAATTCCGTAAAAGAAGACGGCAAGGAAGCGAA
GAGTTGTTTGATCTGCGGCGATCGAGCGACTGGTCTTCATTATGGAATCATCTCATGTGA
AGGATGCAAAGGATTCTTCAAGAGAAGCATCTGTAATAAGCGCGTGTACAGATGCACAAG
AAGCAAGAATTGTGTGATGTCACGTAAACAACGAAACAGATGTCAATATTGCAGATTGCT
CAAATGCCTGCAGATGGGAATGAACAGGAAAGCGATTCGTGAAGATGGTATGCCTGGTGG
ACGTAACAAAAGTATCGGTCCCGTGCAGATTTCTGAAGATGAGATTGATCGAATAATGAC
TGGGAAGGAGTTTGAAGATGAGCTCATGCAGAGTCAAGCTCAATTTCATGATGGCACAAA
AGGTGGATCACCCAACACCCCCACGCAACAGTACCCACATGGGTATTTTGGGGGTAACGG
GAATCACAGAAGTGATTGGTCGCCTGTTCCTGGGTTGGCACCAAATGCGCAGTTGTCGCT
GGCAGCAATGAATAAACACATGCACCCAGTGACATCAGCAAGCTCGCCAATCAACATGAG
ATATACAAATTTAAGCAGGGACCAAGACAGCTTCACTTCATATCCAAGTCATTTACCTCA
ATTCAATCCATTCATGCAGCAAGTCAGAATTAATCATTCACCGGAATCAGCTGCAGAGTT
GAGCAGCTCAGCATTGGTTGAGCAACTATTGCAAGCAGAAGACATGTCGGACCTCCAGTC
ACTATCTACCTCAAAACTACACTCAAAAATTCAGATCAACAAAGACGATATATTTTGCCT
TTTATGCACTGTCGCTGACGATATGCTTTACAGACAAATTGTCTGGGTCAAAAAATTGCC
ATTTTTTGAGCAAATTTCTATCAAAGATCATACAACATTGTTGAGCACAACGTGGGCGGA
AATTATTTTGCTTGCAGCTTTGTGCATTCACGAGCATCAATTGTTCGGAGATCTTACGGA
TATTACGACGAGATATCTGCCTGACCCAGATGAACTCTCACGGTTCTCGGATTACGAGAT
GGTCGTATTGGAAAGAATCACCAACCTTTATCAAAAGCTCTCGCAGTTGAAAGTCGATAA
AGAAGAATACGTGATCATGAAAGTCATCAATTTCTTGAATCAAGATATCAAAGGTTTGCA
GGAAGTGGAACAGATAGAGGAGATCAATAAACGATACTGGTATGCTTGCCAACGATACAC
CGAGTTGAAAGCCATGGAGAAGAACATGGAATCTGGAAGTGGAGGTTCTGGAAGATTCCG
TGATTTGATGTTGTGTTTACCAGAAATTCGTCACGTTGCAGGAAAAATGCTGAATACTGA
TATCGCTAAACTGCCATTGTTGTTCAAGGCGATACTTCACACTTGCAAGCTACAGCGGAT
ACAGTCTGGTCAAGTGGCTCCGAACGTGTCAACGAATAACAATAACAATATGGCTACACC
ATCTACAACAACATCAAGCAATGTTGATGCTACTGAAGGGATGAAAGAAGAAGGATTGTC
TTCCAATGACGTGGAAGCGGCCTCTAGCAACTCCCCTAGCAACGACAGTTACTACGGTGA
CGAGCGAAAGTGAACATTCCAAGCATGACAACTCGACGACACGGGATGGTTTCGCTTCAA
TGATTTATGCAAATATTTGCAGAACGGAAAACCAAAAATTTGATATTTTTGAACCACTCA
ATATAAATGTTTCCATTTTTGTTTTATTATTATTCCTAATATTGTGATTATTATTACTAA
CGTTCTTTTTTCTTGTGTTTTGCTGCGATTTTTAATCCAGAACATTTTGTATTTTTAATC
AACATCCATTGATGTAATTGTCAACGAATTTGTTTTATTGTCTCGAATATCATGCAATAA
TTTGCTTGTTTTCTACTCAGGGAAAATAAACTGTGAAAAGGTTTCGGAGACAACCTATTA
TAATTCCTTTATTATATTTCTTAACAAGCAAATGCCTGCATGACCGATAAGAAATGGATT
TGATTATTATTTTATTGTGTTTTTATGTCTGTATGCCGCTATACCTCAAGATTGCTCAGC
ACAAATCGCATCAACAACAGAATATTAATAACAGAACTTCATTAATAACCTCCCTCATAC
ACCGAGATTATTCTAAAATTAACAAACCCATATTTTCTAACGCATAATTTCTACCTCCTG
TCAGCGAAATTCGGACAGTGACCGCTTTGTAGTGTTAAAAGACCGTTAGTTATCCCTGGC
CTGTCCACCTCAACATAGTAACTACACTGTTTGCAGCAATTAAAACTTAACTTCGACCAA
CCTTCTTGATACCTCATTTATTAAGACAACGGCCAGTAGCATGACAATCCTTTACTGTGC
TTTCTTGCGTAATAATTACAAGTCGTGGTCTGATTTTAACCGGAATAATCTGGATCTCGT
CAGTAGCGTACACATTTTTTGATGATTTTAATGTTTTTCTTCAATTTTATTTTGTCGCAT
TCTTCAACATGAATTCTGATCAGGATTAATTAATATATTACTAATATCTCATGTTGTTAT
ATACCTCTACAGTTATTGTCAAAATTGTCATTGTTATAATAGTCATTGTATTCCGACTAT
GCAAACTCTTAATGCAAACTAAAATCAGACATAAGAATTAGATTAGCCATTTTGGCTACG
TAAATTGACAAAAAACAATTTGTATTTTGCAGATTTATCTGTAATGACATAACCAACTTT
TAACCAAACGTACCTCATGATAATATTATTCCAGATTCAGGCCAAGTTTCCTGTTGACAA
TAACTCAGTGTACTTTTCATGCATGCCTTATTTTTATATAATTAACAAAATACCAAACAT
TCAGGACATTTATGGTCTTGCTTCCATCCTGTGGGCTTCGTTCCCTCACGCTATTCCTAA
CCAAGAATTGATAAATTTTTCTTTACTTTTTTGAAATTTCATGACAATGTAAGAATTGTG
AATAAACACAACTGGACAGATAATA
| Gene3D |
Znf_NHR/GATA (IPR013088) - T[107-214] 3.3E-33 |
| SMART |
Znf_hrmn_rcpt (IPR001628) - T[114-185] 1.1E-34 |
| ProSiteProfiles |
Znf_hrmn_rcpt (IPR001628) - T[114-189] 20.359 |
| Pfam |
Znf_hrmn_rcpt (IPR001628) - T[116-184] 4.5E-28 |
| PRINTS |
Znf_hrmn_rcpt (IPR001628) - T[117-133] 3.5E-17 - T[133-148] 3.5E-17 - T[166-174] 3.5E-17 - T[174-182] 3.5E-17 |
| ProSitePatterns |
Znf_hrmn_rcpt (IPR001628) - T[117-143] . |
| PRINTS |
Nuclear_hrmn_rcpt (IPR001723) - T[178-188] 2.7E-16 - T[379-400] 2.7E-16 - T[400-416] 2.7E-16 - T[471-486] 2.7E-16 - T[536-553] 2.7E-16 |
| SUPERFAMILY |
NHR_like_dom_sf (IPR035500) - T[187-198] 1.18E-37 - T[283-322] 1.18E-37 - T[364-567] 1.18E-37 |
| Pfam |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[377-554] 7.2E-16 |
| SMART |
Nucl_hrmn_rcpt_lig-bd (IPR000536) - T[378-548] 3.1E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NR6A1_HUMAN | 52.248 % | 473 | 3.1E-162 |
| RXRA_HUMAN | 33.636 % | 118 | 1.98E-28 |
| NR5A2_HUMAN | 26.641 % | 155 | 1.77E-40 |