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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA50YL04'
  2. Clone 'cien186177'
  3. Clone 'AHC0AAA149YE10'
  4. Clone 'cien51852'
  5. Transcript 'Moocul.CG.ELv1_2.S11...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S110215.g11549.01.t

Possible name(s)

AFG3L2; SPG7; YME1L1

Location

S110215 [2,153 / 4,208]

Sequences

Amino acid sequence

Length: 684

>Moocul.CG.ELv1_2.S110215.g11549.01.p
MLSITFANQISSWIAQNSLLTFSKTCSYSNVPKHSNGKKYETAQAKDQFLMIQPSYLDRM
MPMCSILESNAQATSLPAFNRKYQHLLCNNNPLIMNQVRAFRSRRTEQKIKEKNAQDSTE
GDRTLKFSQYFGNSTKKTSNNIHEIMKEYSIDSKQAPIVKLGYEEGVHQANKKPVGRILI
SIGVLIAILYYFKPLKVSSSKFGDLMIQNKDYLVEHPELTFDDVKGIDEVKDELENIVDF
LKDPDKYCKLGGKLPKGILLVGSPGTGKTLLAKAIAGEANVPFFYASGAEFDEMFVGVGS
SRIRKLFKDARESSPCIIFIDEIDACGNKRSNSAIQPYARQTINQLLQEMDGFTESEGVI
VLGATNTISVLDKALRRPGRFDQEIHVLNPDIKGRKEILQLYVDKTIHADDIDLDKIARL
TSGMTGAELENLVNQAAIQAARLSKPRMSNADIDYALDKIQMGNEVKGKSYTEEELRNTA
FHEAGHAIAAYYTPKSDPIFKASIRQRGHALGHVSLVPQNERNQTKDQLLGRIDVAMAGR
VAEEIIFGEGNVTTGASSDLENATGIAKGMILKLGMGKGGYLSYDLETISEAAKHEMEEE
VNSILNNSYQKMKDLLSKRQKEHALVANALLKYETVDLDEIKAIIETKDLNSVEIIRKAK
KAKALKAAQVKTPVIEFMHPIQDK

Nucleotide sequence

Length: 2,055

>Moocul.CG.ELv1_2.S110215.g11549.01.t
ATGTTGTCTATAACATTTGCCAATCAAATATCTTCTTGGATTGCCCAGAACTCACTGCTC
ACATTTTCCAAAACCTGCAGTTACTCAAACGTCCCGAAACATTCAAATGGCAAAAAATAT
GAAACTGCACAAGCAAAGGACCAGTTTTTGATGATTCAGCCAAGTTATCTCGACCGAATG
ATGCCGATGTGTTCAATATTGGAGAGTAATGCTCAAGCAACAAGCTTGCCTGCGTTCAAC
AGAAAATACCAACATTTGTTATGTAACAATAATCCATTGATCATGAATCAAGTAAGAGCT
TTCAGAAGCCGAAGAACGGAACAGAAAATTAAAGAAAAAAATGCGCAAGATTCAACTGAA
GGTGACAGAACGTTGAAATTTTCACAATATTTTGGCAACTCCACTAAAAAAACCTCGAAC
AATATTCACGAAATTATGAAGGAATACAGCATTGATTCGAAACAAGCACCAATTGTTAAA
CTCGGTTATGAAGAAGGAGTGCACCAGGCAAATAAGAAACCTGTTGGTCGTATTCTAATT
TCCATCGGCGTTTTAATCGCGATTTTGTATTACTTTAAACCGCTCAAAGTTTCATCATCA
AAATTCGGCGATCTTATGATCCAAAACAAGGATTATCTCGTCGAACATCCCGAACTCACA
TTCGACGATGTCAAAGGAATTGACGAAGTCAAAGATGAATTAGAAAACATCGTCGACTTT
TTGAAAGATCCTGATAAATACTGCAAATTAGGTGGGAAGTTACCCAAAGGTATTCTTTTG
GTTGGTTCACCTGGCACGGGAAAAACTCTCCTTGCAAAAGCAATCGCTGGTGAAGCGAAT
GTGCCATTCTTTTATGCTTCTGGTGCTGAATTTGATGAGATGTTCGTTGGAGTCGGTAGT
TCAAGAATTCGTAAATTGTTCAAAGACGCTCGGGAAAGTTCACCTTGTATAATATTCATC
GATGAGATCGATGCTTGCGGAAATAAACGATCGAACAGCGCTATACAACCATACGCTCGA
CAAACAATAAATCAGTTGTTACAAGAAATGGATGGATTTACAGAAAGTGAAGGCGTCATT
GTGCTTGGTGCTACAAACACAATCAGCGTTTTGGATAAAGCTTTAAGAAGACCCGGTCGA
TTTGATCAAGAAATTCATGTCTTGAATCCTGATATAAAAGGCAGAAAAGAAATCTTACAA
CTTTACGTTGATAAAACCATTCATGCCGATGATATTGATCTTGATAAAATTGCTCGCCTC
ACAAGTGGAATGACGGGGGCAGAGTTGGAAAATTTGGTTAATCAGGCAGCCATTCAAGCT
GCACGATTGTCCAAACCAAGAATGAGCAATGCCGATATTGATTACGCTTTGGACAAAATT
CAAATGGGCAACGAAGTTAAAGGCAAAAGTTACACAGAAGAGGAATTGCGGAATACAGCT
TTCCATGAGGCGGGGCATGCTATAGCTGCATATTACACACCGAAATCGGACCCGATTTTT
AAAGCTTCTATCAGACAGCGTGGACATGCCCTTGGACACGTCTCCTTGGTTCCACAAAAT
GAGAGAAATCAAACCAAGGATCAGTTGCTTGGAAGAATTGATGTGGCAATGGCAGGCCGC
GTCGCTGAAGAAATTATTTTCGGAGAAGGAAATGTTACAACCGGTGCATCTAGCGATCTG
GAAAATGCAACAGGAATTGCAAAAGGAATGATTTTGAAGTTGGGAATGGGAAAAGGAGGA
TATCTGAGTTACGATTTGGAGACGATCAGTGAAGCTGCAAAACACGAAATGGAAGAAGAA
GTTAATTCCATCTTGAACAATTCTTATCAAAAGATGAAAGATCTTTTATCAAAACGACAA
AAGGAGCATGCTTTAGTAGCAAACGCTTTGTTAAAATACGAAACTGTTGATCTGGACGAG
ATAAAGGCCATTATTGAAACTAAAGATCTAAATTCGGTTGAAATTATTCGAAAAGCAAAG
AAGGCAAAAGCATTGAAAGCAGCACAAGTGAAGACTCCTGTTATTGAATTCATGCATCCG
ATCCAAGATAAATGA

InterProScan

TIGRFAM
FtsH (IPR005936) - T[202-645] 3.4E-159
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[215-460] 5.1E-64
SMART
AAA+_ATPase (IPR003593) - T[254-391] 2.1E-22
Pfam
ATPase_AAA_core (IPR003959) - T[258-387] 6.3E-41
ProSitePatterns
ATPase_AAA_CS (IPR003960) - T[359-377] .
Pfam
Peptidase_M41 (IPR000642) - T[451-644] 1.1E-51
SUPERFAMILY
Peptidase_M41-like (IPR037219) - T[471-648] 4.32E-52

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SPG7_HUMAN 35.872 % 314 1.68E-96
AFG32_HUMAN 39.36 % 350 6.82E-110
YMEL1_HUMAN 48.752 % 484 5.6E-162