- Transcript 'Moocul.CG.ELv1_2.S11...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S110212.g11544.01.t
Possible name(s)
DDX10; DDX18; DDX31
Gene model
Location
S110212 [8,016 / 10,483]
Amino acid sequence
Length: 755
>Moocul.CG.ELv1_2.S110212.g11544.01.p
MSNNLTLNLSSNPGTTRSYVTAKEKKGKFYGKRSVRSIKKGLRKEQRRKPKYNINSMLKA
NDEYSAGFNFTDHKKEETTKNTKPQSVAKSRPIATAGRTGTNKAKTTDYQNKPKPYEDDE
FKPSNFSTKNKKYTGKSNIIKASLFNNNPEIPGVVQPSINKITESTFSERNFTEFDLHER
LSDYLINKMNHKTATAIQQKTIPVLLKGSDALVKSQTGSGKTLAYAVPLIQNLQSIKPEV
SRLNGPLALVLVPTRELASQTYEIINKLTLPFRRIVATWIMGGEKRKSEKARIRKGVNIV
VGTPGRILDHIQSTECFSLKNVKWLICDEADRLLDMGFESQIKDIITALQENRQENEKWQ
SVLLSATLPHKLESLAKVTLSDPVRVQVGEEDDDVEDDSFAIPDNLHQHIAVVPSKLRLV
SLMMFLRWKLSLSPSKILVFVSCRDSVVFHYEITKFLITQGIIKQKSNSCRILKLHGGML
QGNRQKVFSEFQASSSGVLFCTDVAARGLHLPNVDWVIQYTCPCNPVDYIHRVGRTARAG
EKGEALLMLLPSEMKYLNLLTQYNIPITEISLDSILNCGNAPESGAENQHAKEEANRLQN
QIEEYIDDNEKLLLQAKLAYGSFIRSYSSYPSHLKTIFHVKHLHLGHVTKSFGLNQTPKD
IISSLQKSVKYLQMNNTGKTNKKGNTAKEVIESLQRSHEVNALHKENEIDAPSAANIVAI
RKRRQVSNKLNLMSEFGSGLDVVKKPKLSISTTTE
Nucleotide sequence
Length: 2,268
>Moocul.CG.ELv1_2.S110212.g11544.01.t
ATGTCGAACAACTTAACCCTAAATTTGTCTTCGAACCCTGGTACGACAAGGAGCTATGTT
ACTGCTAAAGAAAAGAAAGGGAAATTTTATGGGAAAAGAAGCGTGCGGTCCATTAAAAAA
GGACTGCGGAAGGAGCAGCGCCGAAAACCAAAATATAATATAAATTCAATGCTAAAAGCA
AACGACGAATATTCCGCTGGATTCAACTTTACTGACCATAAGAAAGAAGAGACAACAAAG
AACACGAAACCACAAAGTGTAGCAAAGAGTAGACCTATTGCTACTGCAGGTCGTACTGGT
ACTAACAAAGCAAAGACAACTGACTACCAAAATAAACCTAAACCCTATGAAGATGACGAG
TTTAAACCAAGTAATTTTTCTACAAAAAATAAAAAATACACTGGTAAAAGCAACATAATC
AAGGCTTCGTTATTCAATAATAATCCCGAAATTCCTGGTGTTGTCCAACCAAGTATTAAT
AAGATAACGGAGTCAACATTTTCTGAGAGAAACTTTACAGAATTCGACTTGCATGAACGT
TTGTCCGATTATTTAATCAATAAAATGAACCATAAAACAGCGACTGCTATTCAACAAAAA
ACAATCCCTGTGTTACTGAAGGGTTCCGATGCGTTAGTCAAGTCACAAACTGGTTCTGGA
AAAACATTGGCATATGCTGTTCCATTGATACAAAATTTGCAGTCAATTAAACCTGAAGTT
TCAAGATTAAATGGTCCCCTTGCGTTGGTGTTAGTTCCCACAAGAGAATTAGCGTCACAA
ACTTATGAAATTATTAATAAGTTAACTCTGCCTTTTCGGCGAATTGTGGCTACGTGGATA
ATGGGTGGTGAAAAAAGGAAATCAGAAAAAGCTAGAATACGGAAGGGGGTGAACATAGTT
GTTGGCACTCCAGGACGAATTCTTGATCACATTCAATCTACTGAATGCTTTTCTCTTAAA
AATGTGAAGTGGTTAATATGTGATGAAGCTGATCGTCTTCTGGACATGGGATTTGAAAGT
CAAATAAAAGACATTATAACAGCTCTTCAAGAAAATCGACAAGAAAATGAAAAATGGCAA
AGTGTTTTACTTTCGGCTACCTTGCCTCACAAACTTGAGAGTCTTGCTAAAGTCACGTTG
AGCGACCCGGTTCGTGTTCAAGTTGGTGAAGAGGATGATGACGTTGAAGATGACAGTTTT
GCGATTCCAGATAACTTGCATCAACACATTGCTGTCGTACCAAGCAAACTTCGACTTGTT
TCATTAATGATGTTTCTCAGATGGAAATTGAGTCTTTCGCCAAGCAAAATATTAGTGTTT
GTTTCCTGCCGGGATTCTGTGGTTTTTCATTACGAAATAACAAAATTTTTAATCACCCAA
GGAATCATCAAACAGAAATCAAATTCTTGTCGCATATTGAAGCTTCATGGTGGAATGTTA
CAAGGAAACAGACAGAAAGTTTTCAGTGAGTTTCAAGCTTCTTCATCTGGTGTTTTATTC
TGTACGGATGTTGCTGCTCGTGGTCTTCATCTTCCAAATGTGGATTGGGTGATCCAATAC
ACTTGTCCATGCAATCCTGTCGATTACATACACAGGGTCGGAAGAACAGCAAGAGCAGGG
GAAAAAGGTGAAGCGTTGCTAATGTTGCTTCCATCAGAAATGAAGTATTTAAATTTACTG
ACACAATACAACATCCCGATAACTGAAATATCACTCGACTCGATCTTAAACTGTGGAAAT
GCACCTGAAAGTGGTGCTGAAAATCAACATGCGAAAGAGGAAGCAAATCGATTACAGAAT
CAAATTGAGGAGTACATTGATGACAACGAAAAACTTCTATTGCAAGCAAAACTTGCTTAC
GGTTCATTCATCCGTTCGTATTCCTCGTATCCCTCACATTTAAAAACGATATTTCATGTG
AAACATCTTCATCTGGGACACGTAACGAAAAGTTTTGGTCTGAATCAAACACCGAAAGAC
ATCATTTCATCCTTGCAAAAATCTGTGAAATATTTGCAGATGAATAACACTGGAAAGACT
AACAAGAAAGGTAACACTGCTAAAGAAGTTATCGAATCACTTCAGCGCTCGCACGAAGTT
AATGCACTGCATAAGGAAAACGAGATTGATGCGCCATCCGCGGCAAATATCGTTGCTATA
AGGAAACGGCGGCAGGTGTCAAACAAACTTAATTTAATGTCGGAATTTGGCAGTGGGCTG
GATGTTGTGAAAAAACCTAAACTTTCAATTTCAACAACAACAGAGTAA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[170-199] 7.107 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[190-409] 3.1E-50 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[195-373] 2.8E-48 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[202-386] 32.025 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[244-559] 6.89E-60 |
| CDD |
Helicase_C (IPR001650) - T[405-548] 3.64721E-33 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[418-576] 18.566 |
| Pfam |
Helicase_C (IPR001650) - T[426-540] 6.1E-24 |
| SMART |
Helicase_C (IPR001650) - T[452-540] 3.4E-26 |
| SMART |
DUF4217 (IPR025313) - T[597-662] 9.8E-22 |
| Pfam |
DUF4217 (IPR025313) - T[599-659] 5.0E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX10_HUMAN | 33.656 % | 254 | 8.14E-73 |
| DDX18_HUMAN | 38.994 % | 306 | 8.67E-94 |
| DDX31_HUMAN | 43.23 % | 491 | 8.77E-163 |