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TRANSCRIPT CARD

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  1. Clone 'ma326g23'
  2. Clone 'citb094b23'
  3. Clone 'man33n16'
  4. Clone 'AHC0AAA241YF13'
  5. Transcript 'Moocul.CG.ELv1_2.S10...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S109695.g11298.01.t

Possible name(s)

LOXL2; LOXL3; LOXL4

Location

S109695 [498 / 2,568]

Sequences

Amino acid sequence

Length: 435

>Moocul.CG.ELv1_2.S109695.g11298.01.p
MLHTWYFVFVFFGIVTFGESERFRLRGGDGLREGRLEILSSSEGWMAVCDQLWDMNSANV
VCRQMGFPSAEELIKGYHSTGVKKVSMTLRNLKSICNGSEINLSQCKRHNATTPCSNQSQ
VGVRCSPRDKHSLLTTLRFEKTSGIIRTKGIGHMWRYVCDDDWQMKEAIVTCRTISRLNV
RNITLMDNPKPRLPAITNVSCTGFENTLHACNFTEGLCNRIVTVECGYDAPDIITDLHIL
QRSLKVDVRAPQNLTCPREEGCLSASGYLKENVNKSRRLLTFSVMVYNIGTADLHPPTPR
HEWLWHDCHEHYHSVEELATYELIGDGGVGRGHKISFCLRDSVCSNGKNLVYECDKHGLG
AQGISVGCGDYYGRTLDCQWIDVTDLPDGKYLLKIRLNPSLSFSELDYENNETRCYLNLF
GLHATYEGRCWLHRR

Nucleotide sequence

Length: 1,438

>Moocul.CG.ELv1_2.S109695.g11298.01.t
ATATCTTGTTCATCATATGGCCTTGGGATATTTCTAAAACGAGATTACTTTTCGTTTTCG
TCCTGATTGAGTTGAGTTTGTAGTTTAACAGAACAGACGAAATTAATATGTTGCATACTT
GGTATTTCGTGTTTGTGTTTTTCGGAATAGTGACATTTGGTGAATCAGAACGATTTCGTT
TAAGAGGGGGTGATGGGTTAAGGGAAGGGAGGCTTGAGATTCTCAGCTCATCTGAAGGTT
GGATGGCAGTCTGCGACCAGTTGTGGGATATGAATTCAGCAAATGTTGTCTGTAGGCAGA
TGGGATTCCCATCGGCTGAGGAACTGATCAAGGGATATCACTCGACGGGTGTAAAGAAAG
TGTCAATGACATTGAGAAATTTGAAAAGCATTTGTAACGGATCGGAAATTAATCTAAGCC
AATGCAAGCGCCACAATGCAACTACACCTTGCTCAAACCAATCACAAGTTGGCGTAAGAT
GTTCCCCACGTGACAAACACAGTTTACTGACAACGTTAAGGTTTGAAAAAACATCTGGTA
TCATCCGAACCAAAGGCATCGGTCACATGTGGAGATATGTATGTGATGATGATTGGCAAA
TGAAAGAGGCCATTGTCACTTGCAGAACCATATCAAGGCTTAACGTCAGAAACATAACAC
TGATGGATAACCCTAAACCACGCCTCCCAGCCATTACAAACGTTTCTTGCACTGGCTTCG
AAAACACGTTACATGCTTGCAATTTTACAGAGGGTTTATGTAATAGAATCGTAACAGTGG
AATGTGGATACGATGCACCTGATATTATCACGGATCTCCATATCTTACAACGGTCATTGA
AGGTGGATGTAAGAGCGCCTCAAAATCTTACATGTCCACGTGAGGAAGGATGTTTGTCTG
CATCTGGTTACCTGAAAGAAAACGTCAACAAATCAAGACGTTTGCTGACCTTCTCTGTCA
TGGTTTATAACATTGGAACAGCAGATCTGCACCCACCGACACCCAGACATGAGTGGCTTT
GGCATGATTGCCATGAGCATTACCACAGCGTTGAAGAACTTGCAACTTACGAGTTGATTG
GAGATGGCGGGGTTGGACGAGGACACAAGATTAGTTTCTGTCTAAGAGACAGTGTATGCT
CCAATGGAAAGAATCTGGTGTATGAGTGTGACAAACATGGATTGGGAGCGCAAGGAATCT
CCGTGGGATGTGGCGACTATTATGGACGGACATTGGACTGCCAGTGGATTGATGTAACAG
ATCTGCCAGATGGAAAATACCTGCTGAAGATTCGACTCAATCCTTCGTTAAGTTTCTCTG
AGTTGGATTACGAAAATAACGAGACGAGATGTTATCTTAATTTGTTTGGCCTCCATGCTA
CATATGAAGGAAGATGTTGGTTACATCGACGATGACAGCTACTTGATTATGAAGATAT

InterProScan

Gene3D
SRCR-like_dom_sf (IPR036772) - T[17-133] 4.5E-24 - T[139-231] 1.2E-8
SUPERFAMILY
SRCR-like_dom_sf (IPR036772) - T[20-128] 5.23E-23 - T[152-226] 4.45E-9
ProSiteProfiles
SRCR (IPR001190) - T[23-126] 22.334 - T[123-227] 13.586
PRINTS
SRCR (IPR001190) - T[23-39] 2.7E-11 - T[43-54] 2.7E-11 - T[58-68] 2.7E-11 - T[92-106] 2.7E-11 - T[114-126] 2.7E-11
SMART
SRCR-like_dom (IPR017448) - T[23-126] 1.6E-25
Pfam
SRCR (IPR001190) - T[27-126] 1.9E-19 - T[152-226] 1.5E-7
Pfam
Lysyl_oxidase (IPR001695) - T[231-422] 2.1E-64
PRINTS
Lysyl_oxidase (IPR001695) - T[240-264] 3.8E-28 - T[285-306] 3.8E-28 - T[307-327] 3.8E-28 - T[355-377] 3.8E-28 - T[378-397] 3.8E-28 - T[398-415] 3.8E-28

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LOXL2_HUMAN 33.79 % 247 1.77E-74
LOXL3_HUMAN 34.873 % 244 2.8E-73
LOXL4_HUMAN 33.183 % 233 1.96E-69