- Clone 'AHC0AAA126YL13' >
- Clone 'ciad085g06' >
- Region 'REG00000033' >
- Transcript 'Moocul.CG.ELv1_2.S10...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S106896.g10427.01.t
Possible name(s)
LHCGR; RXFP1; RXFP2
Gene model
Location
S106896 [36,319 / 41,450]
Amino acid sequence
Length: 998
>Moocul.CG.ELv1_2.S106896.g10427.01.p
MNWFRITTTFILLFCIHMQNAQALPYFFCDDKRLIFEENFCNGIPNCRDGSDEIPFVGTE
VYDPITNVVKCKNAGNNYNASCSLPQEFLCSGQIKCEGLDPCDGICPDQYRCEKTNRCVS
RDTLCDANSCNGCPEDHEKQDGIGFKCMRFGRKCVLPQQLLYDVISDCDGGLDRCYKSKN
ETEVDSYDVRRHDGFEFDTKLCFQCFDGQMIIPSANVCDGQFDCSDLSDECICQSSKPTI
CDQVYRQIGNVEEELIKNETTVKDSKNQLTTTSPPARFDPPMVGNYSEKRQKRSLTFALP
TPPPLLSLCSYGDVQCDDGQCISRQFVCDGWPDCKLGEDESYSFCGATMDCVDLPEDNAI
GQSCICINDCEPIVATYCNGVTECSNNKDECTDNCQRHFQNSCTPYNTAFVFVTAFNCTT
SYSLGSHSIAVKSSDGLAFQTLTIESYCDGFLLCDVGHEDEGEFCNSSLPCGNASLGRVR
VEITKICDGKVDCKDSTDERLTSCNDTRFHCLAYGGRRISIPNEQVCDFSITCDDAEDEL
GCNDERFYCEDGKMPIFVREEEIFDGVQDCADWSDECPSNPSLRQENIFSSRYELIANPV
LRAMVWVMGLASIVGNIAVIAKELWKLRHSKRSHGAILGNRCIIINLALSDFLMGLYLIS
LAGIGIKFQGNYCAHELEWRSSQTCTSLGILASVSAETSVLSLVSLTTFRLYSVFRPLSS
REFPKTKHIVFCVICCWAISLLIAFLPTIPSLSYVFLHEVFFKSNPFVTSKTMEIDTYRK
LVKDFTIFDNSTGITAAELDNIDSMFWKNLQAFSEDRFSHNEYLKPLYFGYYSVHGVCLP
KFFVPASDKAWKFSIFVTSFNFSSFIFILFAYILIGYKSSHRADVGRTTTDSSSMSKLHL
KIFRLILTDFCCWVPICIMAFVKVFGGNLSNSAYAFAAIILLPINSALNPLLYSNILDNM
VAYCRPAKKRQAPHLITDHTLIKSPGTISTRTAETTLH
Nucleotide sequence
Length: 3,187
>Moocul.CG.ELv1_2.S106896.g10427.01.t
ATGAATTGGTTTCGAATAACAACAACCTTCATTCTGCTATTCTGCATTCACATGCAAAAT
GCCCAAGCGCTTCCCTATTTCTTCTGCGACGACAAACGTTTGATTTTTGAAGAAAATTTT
TGCAACGGAATTCCCAATTGTAGAGACGGGAGTGACGAGATTCCATTTGTTGGAACGGAA
GTATACGATCCGATCACCAACGTCGTAAAATGCAAGAATGCAGGGAACAATTACAACGCC
TCTTGTAGTCTTCCACAAGAGTTCCTCTGCAGTGGACAAATCAAATGTGAAGGATTGGAT
CCTTGTGATGGCATTTGTCCTGATCAATACAGATGTGAGAAAACCAACCGATGTGTAAGT
CGAGACACATTGTGCGATGCAAATTCTTGTAATGGCTGCCCGGAAGACCATGAAAAACAG
GACGGGATCGGGTTCAAGTGCATGAGGTTTGGCCGGAAGTGCGTTCTTCCACAGCAGCTT
CTATATGACGTCATTTCCGATTGTGACGGGGGATTGGATCGATGCTACAAAAGCAAAAAT
GAAACAGAAGTCGATTCATATGACGTGAGACGCCACGACGGATTCGAGTTTGATACCAAA
CTTTGTTTTCAATGTTTTGATGGACAGATGATCATTCCGAGTGCAAATGTTTGTGATGGG
CAGTTTGATTGTTCGGATTTATCGGATGAATGCATTTGCCAATCATCAAAACCTACCATT
TGTGATCAAGTGTATCGCCAGATTGGAAACGTGGAAGAAGAACTGATAAAGAACGAAACC
ACCGTCAAAGATTCTAAGAACCAATTAACAACAACTTCACCACCTGCACGTTTTGATCCA
CCTATGGTGGGAAATTACAGTGAAAAGAGACAAAAACGAAGTCTTACATTTGCGCTACCG
ACTCCACCACCGCTTTTATCCTTGTGTAGTTACGGCGATGTCCAGTGCGATGACGGTCAG
TGCATTTCCAGACAATTTGTCTGTGATGGATGGCCAGATTGTAAGTTAGGGGAGGACGAA
AGCTATTCTTTTTGTGGAGCAACGATGGACTGTGTCGATTTGCCAGAAGACAACGCCATT
GGACAATCATGCATATGTATCAATGATTGCGAACCGATTGTGGCGACGTACTGCAATGGT
GTCACAGAATGCTCCAATAATAAAGATGAGTGCACAGATAATTGCCAACGTCATTTCCAA
AATTCATGTACTCCATACAACACTGCTTTTGTGTTCGTTACAGCTTTCAACTGCACCACA
TCGTACAGTCTTGGCTCGCATTCAATCGCTGTAAAGTCCTCAGATGGTTTGGCGTTCCAA
ACGCTCACAATAGAAAGCTATTGCGATGGTTTCCTCCTTTGTGATGTTGGTCACGAAGAC
GAAGGTGAGTTTTGCAACTCATCTCTTCCATGTGGAAATGCATCCTTGGGAAGAGTACGG
GTTGAAATAACGAAAATTTGCGATGGAAAAGTCGACTGCAAAGATTCAACTGACGAACGT
TTGACATCTTGCAATGATACAAGGTTTCATTGTTTGGCGTACGGAGGAAGAAGAATCAGC
ATACCAAATGAACAAGTCTGCGACTTTTCGATTACGTGTGACGATGCCGAAGATGAACTT
GGATGCAACGATGAGAGATTTTACTGTGAAGATGGAAAGATGCCGATATTTGTGAGAGAA
GAAGAAATCTTTGACGGTGTGCAGGATTGTGCAGACTGGAGCGATGAATGTCCTTCTAAT
CCGTCACTAAGACAGGAAAATATATTCTCGTCGCGCTACGAGCTCATTGCAAATCCTGTG
TTACGAGCTATGGTGTGGGTCATGGGCTTGGCTTCAATTGTCGGAAACATAGCAGTCATC
GCGAAAGAATTGTGGAAGTTGAGACATTCCAAGAGATCTCACGGTGCAATTTTGGGTAAC
CGATGCATAATCATCAACTTGGCCTTGTCAGATTTCTTGATGGGATTATACCTGATCAGT
CTTGCAGGAATTGGCATAAAATTTCAGGGCAACTATTGTGCACATGAGCTGGAGTGGAGA
TCAAGTCAGACATGCACGTCTTTGGGAATACTGGCATCCGTATCTGCCGAAACTTCGGTC
CTGTCTTTAGTTTCACTGACAACTTTTCGCCTTTATTCAGTGTTTCGACCACTATCTTCA
AGAGAATTTCCGAAAACGAAGCACATCGTATTTTGTGTGATTTGTTGTTGGGCCATATCA
CTTTTGATCGCATTCCTCCCAACCATCCCTTCATTATCTTACGTATTCCTCCATGAGGTA
TTCTTCAAGAGCAACCCTTTCGTCACCAGCAAGACGATGGAAATAGACACTTATCGAAAA
TTGGTCAAAGATTTCACGATCTTTGATAACTCGACAGGAATTACGGCCGCAGAACTGGAC
AATATTGACTCAATGTTTTGGAAGAATCTACAAGCTTTTTCGGAAGATAGATTTAGCCAC
AATGAATATTTAAAACCGTTATATTTCGGGTATTATAGTGTCCACGGTGTTTGTTTGCCA
AAATTCTTCGTCCCCGCTTCTGACAAAGCATGGAAATTTTCAATTTTCGTTACGTCATTC
AACTTTTCTTCTTTCATTTTCATCTTGTTTGCTTATATTTTGATTGGCTACAAATCTTCG
CACCGGGCAGATGTTGGAAGAACTACGACTGATTCAAGCAGCATGTCAAAACTACACTTG
AAGATATTTCGATTGATTCTGACAGATTTCTGCTGCTGGGTTCCCATCTGCATAATGGCA
TTTGTAAAAGTATTTGGTGGGAATCTTTCGAATTCAGCGTACGCATTTGCGGCGATAATT
TTGCTGCCTATAAACAGTGCACTCAACCCGTTGCTATATTCAAATATATTGGACAACATG
GTAGCATATTGCAGACCAGCCAAGAAAAGACAAGCACCACATCTAATTACTGATCACACT
TTAATCAAGAGTCCTGGGACTATATCGACACGCACAGCGGAAACCACTCTGCATTAGCCT
GTTTCAATGCTCATTCATATAACGTTCACATCAAACTTTGTTTTCAAGAAAGTAGCCTTA
CTGTTGTAAAAACATCACGAATTAAATGTTGGACTCTCCATGTTTCTACTTTCTAGCTTA
CAATAAAAATGCTTATTTATTATTTATTTATTTATTCACAAAAAATAAGCAAACAAGTCC
GTATCCG
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[21-59] 0.11 - T[198-235] 0.011 - T[308-347] 4.5E-7 - T[464-500] 0.26 - T[503-544] 0.012 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[23-55] 1.2E-6 - T[202-233] 6.41E-5 - T[306-343] 5.11E-8 |
| PANTHER |
TSHR/LHCGR/FSHR (IPR034298) - T[41-103] 1.5E-89 - T[217-979] 1.5E-89 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[203-233] 3.75767E-4 - T[309-340] 1.22075E-7 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[209-230] 2.6E-18 - T[319-340] 2.6E-18 - T[478-499] 2.6E-18 - T[518-539] 2.6E-18 - T[555-576] 2.6E-18 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[308-346] 11.188 - T[464-505] 8.625 - T[503-543] 8.812 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[309-340] 1.4E-7 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[321-345] . |
| ProSiteProfiles |
GPCR_Rhodpsn_7TM (IPR017452) - T[615-953] 18.586 |
| Pfam |
GPCR_Rhodpsn (IPR000276) - T[641-749] 1.7E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|