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TRANSCRIPT CARD

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  1. Clone 'cijv042c16' > 
  2. Transcript 'Moocul.CG.ELv1_2.S10...'

Transcript Model

Transcript Id

Moocul.CG.ELv1_2.S103417.g09623.01.t

Possible name(s)

LHCGR; RXFP1; RXFP2

Gene model

Moocul.CG.ELv1_2.S103417.g09623

Location

S103417 [30,034 / 33,855]

Sequences

Amino acid sequence

Length: 273

>Moocul.CG.ELv1_2.S103417.g09623.01.p
MPLFVMEEQIFDGIQDCEDWSDECPSNSSLRKENVFSSRYELIANPAVIFTECKQLQTVR
TKSGGIFANRCLIINLAISDILMGIYLIALAAKGIEFKGKYCANELDWSYFSTHGVCLPK
FFVTTSDKAWGFSFTVNVINFLSFLFVLVSYLVIMYKSTHRPAVLGTNEKEAKKLSVLQR
KILRLIVTDFCCWMPICVMAFINLSGIEVPHAAYAFSAIILLPINSSLNPILYSNIVDVI
MDKCKKYVPQQTSTQSTNTNTISNINETVTSKT

Nucleotide sequence

Length: 1,789

>Moocul.CG.ELv1_2.S103417.g09623.01.t
AAACAACGCATATGGTCCGTCATGTATACATTTTGAATTTTTGTATAAGCTTTTACTAGG
TAATACGGTTTGCTTTAAGACCACTGGAGAGCAACAAAATTGGGGTATGTGGCTTTGGAA
GCATACAGTGCGAGACTGGACCTTGCATCGGTCGGGATAAAGTATGCGATGGTAAGGTAG
ATTGCACGAAGCCTAACGAAGATGAGGGGGAAGATTTCTGTGGTGTTACTCTTAAATGCT
CTGAATACAATAATAAAACGCTTTCTCCTGGCAAATGCTCATGTACAGGAAAAGGTGGAT
GTCAAACTGTTGTGGCGACAGCATGCGATGGTGAAGACCAATGTTACTATTCAGAAGAAT
GTTCTACGAGTTGCAGGGAAACTAGAACTCGACGACAAGTTTCTGAATATAACTGTATTG
TCAGTATACCGCCAAGACCACCATACAAATGTACAACTTCACAGTTTTTGCGCGGTGCGA
AAAATTACACAATTAGATCTTCCAATTTCACTTCAACGAAGTACGTATTCGAGAGCTTTG
TGTTATATGGAAAATGTGATGGGAACTTGTTATGCGATGTTGGATGGGAAGATGAACTAA
GCTGCTATGGTCGAACTTCTTGTGAAAATGCGACCAAAGGAAGAGTGAGTTTCAGTAAAG
CGGAAACTTGCGATGGAATCGTTCATTGCAAATTGAAGACTGACGAAAGAAATTGCTCCA
CGCGTTTCGAATGTTCAGCGTACGGTGGCACGAGAATAAGTATCAGTGAGCGTCTTCGAT
GTGATTATTTCATCGCCTGCGACAACGCTGAGGACGAATTGGGCTGCCACGATGGTAGAT
TCTACTGTGAAGACAGAAAGATGCCACTATTCGTAATGGAAGAGCAGATATTTGACGGGA
TTCAAGATTGTGAGGATTGGAGTGATGAATGTCCTTCCAACTCGTCCCTTCGAAAGGAAA
ATGTATTCTCGTCACGCTACGAACTGATTGCTAATCCTGCTGTCATATTTACTGAATGCA
AGCAATTACAAACCGTAAGGACCAAATCAGGCGGAATATTCGCCAACCGATGTCTTATTA
TTAACCTGGCAATATCTGACATTCTTATGGGAATATATTTGATCGCTTTGGCAGCAAAGG
GAATCGAATTCAAAGGCAAATATTGCGCCAACGAATTAGACTGGAGTTACTTCAGCACAC
ATGGAGTTTGCCTTCCTAAATTTTTCGTCACGACATCTGACAAAGCGTGGGGATTTTCAT
TTACGGTTAACGTGATCAACTTTCTTTCTTTCCTCTTTGTCCTGGTGTCTTACCTTGTGA
TAATGTACAAATCAACTCATCGACCAGCAGTACTTGGTACCAATGAAAAAGAAGCCAAAA
AACTATCCGTTCTACAAAGAAAGATTCTGCGGCTCATTGTGACTGATTTTTGCTGTTGGA
TGCCAATTTGTGTGATGGCGTTCATCAATCTATCCGGCATCGAAGTTCCCCATGCTGCTT
ATGCCTTCTCTGCAATCATATTACTGCCAATCAACAGTTCTCTTAATCCAATACTGTATT
CAAACATAGTGGATGTTATTATGGATAAATGTAAGAAATATGTGCCGCAGCAGACGTCAA
CACAATCAACCAATACAAACACAATTTCGAATATCAACGAAACAGTCACCTCAAAAACTT
AAAACGATGATAATGAAAAAGTACCTCAGCTGAAACGAAAAAAAACATATATAATAATAT
TAATGATCTTTGTTATTGTAGCGCTTATTTTGACCACTTGCTATTGAAA

InterProScan

PANTHER
TSHR/LHCGR/FSHR (IPR034298) - T[42-108] 9.3E-50 - T[110-267] 9.3E-50
PRINTS
GPCR_Rhodpsn (IPR000276) - T[69-90] 5.0E-7 - T[178-202] 5.0E-7 - T[215-241] 5.0E-7
ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[117-233] 9.699

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RXFP1_HUMAN 35.659 % 77.4 5.37E-16