- Molecular Tool 'Etr>Onecut-VP16 (D'Aniello 2011)' >
- Transcript 'Mooccu.CG.ELv1_2.S51...' >
- Transcript 'Moocul.CG.ELv1_2.S10...'
Transcript Model
Transcript Id
Moocul.CG.ELv1_2.S100040.g08848.01.t
Possible name(s)
GRWD1; RBBP4; RBBP7
Gene model
Location
S100040 [44,182 / 45,791]
Amino acid sequence
Length: 436
>Moocul.CG.ELv1_2.S100040.g08848.01.p
MTEEEDEQMSTSEEEEEESDSENEANKEVYIPGEKLKAGEELVHDKSTYKLFHQAQTGAP
CLSFDILRDNLNDNRTDYPASVCIVAGTNSEQGRANHVIVMKMANMHAVKQTSSDDELSD
SESDDEDDRKPTMQAALVLHRGCVNRIRSTKIGGQHVAATWSERRAVHLWDLSKQIEGVE
SSQHLQTFINNHQKKALPLYTFTGHMDEGYGMDWSPTQEGYLLTGDCKSNIHLWTPRNDA
TWHVDQRPFAAHKDSVEDIQWSPNEKTVFMSCSADKTVKVWDIRAKPAAACMLSVNAHES
DVNVINWNKFEPFVVSGGDDAMIKVWDLRKFKEGKPIASFKHHTKAITSVEWHTTDSSVF
AASSADNQVTQWDLAVEPVSINEKKTEPKLKDIPPQLLFIHQGQTDVKEVHWHPQIPGLL
LSTAQSGLNVFKTISV
Nucleotide sequence
Length: 1,416
>Moocul.CG.ELv1_2.S100040.g08848.01.t
ATTTCTTTGACGTGCAGGTTGTTAATCCGTAGATTTCATAATTACATTGTTGTAATAAGT
AAAATGACTGAAGAAGAAGACGAACAAATGTCAACATCTGAGGAGGAGGAAGAAGAATCT
GATTCTGAAAATGAGGCAAATAAAGAAGTATACATTCCTGGTGAAAAGTTAAAAGCAGGA
GAAGAACTTGTCCATGATAAATCAACTTATAAATTATTTCATCAAGCACAGACTGGTGCT
CCATGTTTAAGTTTTGATATATTGAGGGATAATTTGAACGATAATCGAACAGATTATCCT
GCCTCAGTGTGTATTGTGGCAGGAACAAACAGCGAACAAGGTCGTGCAAACCACGTCATC
GTTATGAAAATGGCAAATATGCATGCTGTAAAACAAACTTCATCTGATGATGAGTTATCT
GACAGTGAAAGCGATGATGAGGACGACAGGAAGCCAACGATGCAGGCAGCATTGGTGCTT
CATCGTGGTTGTGTAAATCGTATTAGGAGCACTAAGATTGGTGGTCAACACGTTGCTGCA
ACTTGGTCGGAACGTCGTGCAGTGCATTTATGGGATCTTTCAAAACAAATTGAGGGAGTT
GAAAGCTCTCAACACTTACAAACGTTCATCAATAATCATCAGAAAAAAGCGCTTCCTTTA
TATACATTTACAGGTCACATGGATGAAGGCTATGGCATGGATTGGAGTCCAACACAGGAA
GGATATTTATTAACTGGTGATTGTAAGTCTAATATCCATTTGTGGACCCCAAGAAATGAC
GCAACATGGCATGTAGACCAACGGCCTTTTGCAGCACACAAAGACAGTGTTGAAGATATT
CAGTGGTCTCCTAATGAAAAAACTGTGTTTATGAGTTGTTCAGCAGACAAGACGGTTAAA
GTGTGGGATATTCGAGCAAAACCTGCCGCTGCATGTATGCTTTCTGTTAATGCACACGAA
TCCGATGTGAACGTGATTAATTGGAACAAGTTTGAACCTTTTGTTGTATCTGGAGGTGAC
GATGCTATGATTAAAGTTTGGGACTTGCGAAAGTTTAAAGAAGGCAAACCAATTGCAAGT
TTTAAACATCATACAAAAGCAATTACTTCGGTGGAATGGCACACAACTGACAGTAGTGTG
TTTGCTGCATCAAGCGCAGACAATCAAGTAACGCAATGGGATTTAGCAGTGGAACCTGTG
AGCATCAACGAGAAAAAAACAGAACCAAAATTGAAAGACATTCCACCACAATTATTGTTT
ATTCATCAAGGACAAACCGATGTCAAAGAAGTTCATTGGCATCCGCAAATACCTGGACTG
TTACTTTCCACTGCACAGTCTGGTCTAAATGTTTTTAAAACAATAAGCGTATAAATCATA
AATACTTTTTCAGTGCCTAAAAAATTTTCTGCTGGG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[2-434] 3.3E-96 |
| Pfam |
Histone-bd_RBBP4_N (IPR022052) - T[40-107] 3.3E-13 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[124-432] 1.22E-46 |
| SMART |
WD40_repeat (IPR001680) - T[130-171] 49.0 - T[195-235] 0.0043 - T[241-282] 8.0E-6 - T[288-327] 5.2E-5 - T[333-373] 3.6E-7 - T[394-432] 55.0 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[202-382] 30.795 |
| Pfam |
WD40_repeat (IPR001680) - T[246-282] 2.3E-6 - T[291-327] 2.3E-4 - T[334-373] 0.0076 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[249-284] 13.75 - T[295-329] 13.75 - T[340-374] 10.642 |
| PRINTS |
G-protein_beta_WD-40_rep (IPR020472) - T[269-283] 5.6E-6 - T[314-328] 5.6E-6 - T[360-374] 5.6E-6 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[314-328] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| GRWD1_HUMAN | 51.981 % | 486 | 4.11E-171 |
| RBBP7_HUMAN | 27.703 % | 122 | 6.75E-31 |
| RBBP4_HUMAN | 28.716 % | 127 | 9.55E-33 |