- Transcript 'Boleac.CG.SB_v3.S40....' >
- Transcript 'KH2012:KH.C1.767.v1....' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Mooccu.CG.ELv1_2.S72...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S726169.g47950.01.t
Possible name(s)
ARPC1A; ARPC1B; CIAO1
Gene model
Location
S726169 [7,896 / 9,607]
Amino acid sequence
Length: 365
>Mooccu.CG.ELv1_2.S726169.g47950.01.p
MAEVFSFGATPLCTHAWNADRTQLALSPNNHEIQIYQRNGKQWKLIHTLSEHTGRVTGID
WAPNSNRLVTCASDRNAYVWVLENQTWRPTLVILRINRAATCVKWSPKEDKFAVGSGARL
ISVCYFEEENDWWVCKHIKKPLRSTVLCLSWHPNNILIAAGSSDFRGRVFSGYIKDIEEK
PKATIWGKKMTFGNLMQEFAMPCDGWVQGIQFSASGDRLAMVGQDSTICVAKGGGELALV
KTNNLPFADCAWITENTVIAVGHDYNPMVFSCDDNCTQITFMCNLDQKSKGSGGQQMSAM
AKFRMMDKKASTNADTDVNTRHKNSIMHVANYGPHQVSTSGMDGQVIIWNCKSLESQVQG
LKIV*
Nucleotide sequence
Length: 1,708
>Mooccu.CG.ELv1_2.S726169.g47950.01.t
GTACGACACCGGTAAAAAAAATTTATTCTCTTCCCGCCTTTCAATCCCATAGAAACCACA
TCATGGCTCTGGAAATCATAAGCGTTTCGCTTGATCAGTAATTTCATGCCTCAGTGATCG
CCGCACCTATAGGTATTATTTTATTTCCTCAGCTCTTTGCTTTACAGTTTATCACTTTAC
ATTTCCATCAATTTGTTTCGTGTAGACTGTTCAGAGTCCACGAATAATCATATAAATTTT
ATATATTACTTTCATGTTGACTGATCAGAGTCCGTGAAGACAATCATGGCAGAAGTATTC
AGTTTCGGTGCCACTCCACTATGCACCCATGCTTGGAATGCGGATAGGACACAGCTCGCT
TTAAGTCCCAATAATCACGAGATTCAGATTTATCAAAGGAATGGCAAACAGTGGAAACTT
ATCCATACTTTGAGCGAACATACAGGACGTGTGACTGGCATTGACTGGGCCCCTAACAGC
AATAGATTAGTGACCTGTGCAAGTGACAGGAATGCTTATGTTTGGGTTCTTGAAAATCAA
ACATGGAGACCAACCCTTGTTATTTTGAGGATCAATCGAGCAGCTACATGTGTTAAGTGG
TCCCCAAAAGAAGACAAATTTGCTGTTGGAAGTGGTGCAAGGCTTATCTCTGTCTGTTAC
TTTGAAGAAGAGAATGATTGGTGGGTTTGCAAACATATTAAAAAGCCTCTACGATCAACT
GTTTTGTGCCTATCATGGCATCCCAATAATATACTTATTGCTGCTGGATCATCGGATTTT
AGAGGCAGAGTTTTTTCTGGTTACATCAAAGATATCGAAGAAAAACCTAAAGCAACAATT
TGGGGCAAGAAGATGACATTTGGTAATTTGATGCAAGAATTTGCAATGCCATGTGATGGA
TGGGTGCAAGGAATTCAGTTTTCAGCATCTGGAGATAGATTGGCCATGGTTGGACAAGAC
AGTACAATCTGTGTTGCTAAAGGTGGTGGAGAATTGGCTTTGGTTAAAACCAACAACCTT
CCATTTGCTGATTGTGCTTGGATCACCGAAAACACCGTTATTGCAGTCGGACATGATTAC
AACCCGATGGTATTCTCATGTGATGACAACTGCACACAAATTACTTTCATGTGCAACTTA
GATCAGAAATCGAAGGGAAGTGGAGGACAGCAGATGTCTGCGATGGCTAAATTCCGGATG
ATGGACAAAAAGGCATCCACAAATGCAGATACAGATGTCAACACCAGACACAAGAACTCC
ATTATGCATGTGGCAAACTATGGACCACATCAAGTCTCCACTTCAGGAATGGATGGTCAA
GTAATCATTTGGAACTGCAAGTCTTTGGAGTCTCAAGTGCAAGGTCTTAAGATTGTGTAG
CCGCCATTCAACAGCCTGTGCCGTTACAACCTGTAACCGGATTCATTAAATAATATTAAA
TTATGTCATTTGTTTTATTATTAATTTGTGTAATGCATAATCTAATTTTTGATCAGAATA
TATATTATTGTCATGGTATCATATTATAACTAAGGGAAATACACATAGATATCTTGAATA
TTTCGTTATTATTATGTATGTATTAAGGGTTCAGTGGATATTATTTTTAGTAATAAATAA
TACTATTGTTTGTTAGTGTGTTTTTGTATATTGCCAGCCATTCCCACCAACAAGGGACAT
TGTATTTGGGGGGAGTCACTACTAAAGG
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[95-446] 2.8E-143 |
| PANTHER |
ARPC1 (IPR017383) - T[97-457] 1.1E-147 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[106-452] 1.22E-46 |
| SMART |
WD40_repeat (IPR001680) - T[137-176] 4.1E-8 - T[181-220] 8.4 - T[226-266] 2.8 - T[287-327] 10.0 - T[407-445] 12.0 |
| Pfam |
WD40_repeat (IPR001680) - T[138-175] 2.2E-5 - T[239-259] 0.17 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[144-185] 11.287 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[144-175] 12.213 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[432-446] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARC1A_HUMAN | 56.948 % | 420 | 4.34E-147 |
| ARC1B_HUMAN | 53.117 % | 409 | 6.92E-143 |