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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  2. Transcript 'Phfumi.CG.MTP2014.S1...' > 
  3. Transcript 'Mooccu.CG.ELv1_2.S72...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S723793.g47559.02.t

Possible name(s)

WDR45; WDR45B; WIPI1

Gene model

Mooccu.CG.ELv1_2.S723793.g47559

Location

S723793 [2,869 / 3,814]

Sequences

Amino acid sequence

Length: 303

>Mooccu.CG.ELv1_2.S723793.g47559.02.p
MSYEVNHLSFNQDKSCFVVAMKSGVRVYNAQPLMEKCRLDGEVVGSTGKVSMLYRTNLIA
FVGSGKSSKYPPDTVVVWDDKRKHLVLEYTFGSDVLNVKMRRDKLIVVLLRRTYVFNFPN
NSKKLMEIDTRNNVYGLCEVSTSSDKQIMAVPGHRIGTLQLIDLATADIGDSKTPVTINA
HQGNLACIAINHQGSLVATASEKGTLIRLFDTQTRQKMVELRRGTDEATLYCINFSNDSS
FLCASSDKGTVHIFALKDTALNRRSAFAKAGKVXXXXFPNNSKKLMEIDTRNNIYGLCEV
STS

Nucleotide sequence

Length: 945

>Mooccu.CG.ELv1_2.S723793.g47559.02.t
ACAGCATGTAAATGTTTATAATTGTGTGCCACCATCATGTCATATGAAGTAAATCACTTG
AGTTTTAATCAAGACAAATCATGTTTTGTCGTTGCGATGAAGTCTGGTGTGCGTGTATAC
AACGCTCAACCACTAATGGAGAAATGTCGTCTTGACGGTGAAGTTGTTGGCAGCACCGGA
AAAGTTTCTATGCTCTATCGAACAAATTTAATTGCGTTTGTAGGTTCCGGAAAGTCTTCC
AAATACCCCCCTGACACTGTAGTTGTATGGGATGATAAAAGAAAGCATTTGGTGTTGGAA
TACACGTTTGGAAGCGATGTTTTAAATGTGAAAATGCGTCGTGATAAACTTATCGTAGTT
TTGCTAAGAAGAACGTATGTATTTAACTTTCCAAATAATTCGAAAAAATTAATGGAGATT
GACACAAGGAACAATGTATACGGCTTATGTGAAGTGTCTACAAGTTCGGATAAACAGATC
ATGGCCGTACCTGGACATAGAATCGGTACACTTCAACTAATTGACCTAGCGACTGCCGAT
ATTGGTGATTCAAAGACACCAGTGACAATAAATGCTCATCAAGGCAACCTGGCATGCATT
GCAATCAATCACCAGGGTTCTTTGGTGGCCACAGCCTCAGAGAAGGGGACGCTAATACGT
TTATTTGACACACAGACACGACAGAAAATGGTAGAATTACGGCGAGGGACAGATGAAGCT
ACTCTATACTGCATAAACTTTAGTAATGATTCTTCATTTTTATGTGCTTCAAGTGACAAA
GGTACTGTCCATATATTTGCATTAAAAGATACAGCTTTAAATCGAAGATCTGCGTTTGCA
AAAGCAGGAAAAGTCGGNNNNNNNNNNTTTCCAAATAATTCGAAAAAATTAATGGAGATT
GACACCAGGAACAATATATACGGCTTATGTGAAGTGTCTACAAGT

InterProScan

SMART
WD40_repeat (IPR001680) - T[5-41] 39.0 - T[183-223] 0.013 - T[226-267] 1.3
SUPERFAMILY
WD40_repeat_dom_sf (IPR036322) - T[16-271] 2.5E-29
Gene3D
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[18-298] 6.6E-21
Pfam
WD40_repeat (IPR001680) - T[242-266] 0.014

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
WIPI3_HUMAN 47.727 % 258 1.07E-84
WIPI4_HUMAN 60.727 % 358 3.91E-124
WIPI1_HUMAN 33.591 % 123 3.83E-32