- Transcript 'Phmamm.CG.MTP2014.S1...' >
- Molecular Tool 'ZicL- MO (Yagi's 25mer MO)' >
- Region 'REG00000210' >
- Transcript 'KH2012:KH.L172.8.v1....' >
- Transcript 'Mooccu.CG.ELv1_2.S71...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S712911.g46128.01.t
Possible name(s)
CACNA2D1; CACNA2D3; CACNA2D4
Gene model
Location
S712911 [1,544 / 17,097]
Amino acid sequence
Length: 1,160
>Mooccu.CG.ELv1_2.S712911.g46128.01.p
MKICFCVLCLLMTIGTSFASLNAGLCSQVANDFGVSMSVKAATYTGYDIMQSVYERRAAD
REFVVHSKHDNRKLVNKMVENLEKFLRKKQEAVKRSVKTIENGSEFFDWKANREPAYYNV
QFLNANPEDVPEEYRPLLMSLPLKSDARFSKDINYNTSVVQVPFDVYSKNEKLVRAIESS
KVLNYQFQLNKELDPSLKWQYFGSTSGFLRIYPGFQWKVQTNDGHANIYDCRKRMWYTEA
ASFPKDVLILVDMSGSMKGLKMSIATHVVSTILETLNDNDFFNVLSFNKSVEYVDSCLTD
TLFPATSRHKKKVFESLKQREPNEIAELGTALEFALKSVVKFQSVGMGSACYSAIMIITD
GSADNYQQIIEKSLNNTNNQIRIFTYVVGRESNSYMKAVEEIACNNAGYFHQIESKNDAY
EKVFQYLTVMNRPQAVNDDHQTIWTKSYYDTTQGDDGFGLVFTLAIPTYLKDAPSTLLGV
MATDIPVNQILDVISIHKAGVNAFVFMITNNGNVVFHPRLITKFTDNYNRQTIKENYNSI
DIGDLEAQDSNATLRNALIQQATAGLIKSPKVLTSRGDWKRPVFQSGTFHHSPVFGTPYS
IGVFIPDGYGNQKLTYGNNLKMLRHGVTYSETECDTVNEHLMKNNHRIINRVSAACSLNF
SDVTLPDSWHFCHYLDGRDQNTDLSISQLDLMLKFVLTDEASTIKCDGDLVNSVLFDSYI
TSALHPLWAEHSKYNSTHQEGIQLTFITTRSGVTRQFWHEDDSSSRIVVRRLLGGFGKQT
FPDFYRRAASYPDNQWVYTPLPTDNYWKKNNAILVTRALKLKSAILGVVGMLIKYQEFST
SFWEQLSVNEGVGCSLTGNSDFDCYVIDDYGRIVISNELSQSKVGEFIGDYEGGATRHLV
DENIFSITHINDNGTVCPETEPKASAMTGSGVSTFLSHPFRKVWSYTFIAAKSLSLVLMQ
VMWSLFSTRQKVEAQSLEPIYRICDISYPIASVNRSNVPYTGSFTCVGFDQTICLREIGF
YGIANSNLFMFVVEKDNQSCVCQNDTGGFYLTPKKRIYQDKVQCDSLRKTQPRRRPVGCK
EHHYTTDVDVGYNYACSNSKSAASGLVAQSWSGVTKNSQKGSSASYFLLSISWFLPYLLV
SMISSFNEDFFNPSTLINS*
Nucleotide sequence
Length: 3,780
>Mooccu.CG.ELv1_2.S712911.g46128.01.t
CAGATACTTAATTTTACCTGTATATAAATTTCGTGGTCTGATGTTAAAGTGTTCTTCTGT
CTGTTGGAGAAGACGAAGTGAATCATGAAGATTTGTTTTTGCGTTTTATGTTTACTGATG
ACAATTGGAACCTCATTTGCTTCTCTCAATGCTGGACTATGTTCGCAAGTTGCCAATGAT
TTTGGCGTTTCCATGTCAGTAAAAGCTGCAACTTATACCGGATATGACATCATGCAAAGT
GTTTATGAAAGAAGAGCAGCTGATCGTGAATTTGTCGTCCACAGCAAACATGATAATCGT
AAACTCGTTAATAAAATGGTTGAGAATCTTGAAAAGTTTCTCCGGAAGAAACAGGAGGCT
GTGAAGAGATCCGTAAAGACGATTGAAAATGGAAGTGAGTTTTTCGATTGGAAAGCGAAC
AGGGAACCTGCATATTACAACGTGCAGTTTCTCAATGCGAACCCTGAAGATGTCCCAGAA
GAGTACCGACCTCTCTTAATGTCACTTCCTCTGAAGTCGGATGCTCGCTTCAGTAAAGAC
ATTAACTACAACACATCAGTTGTGCAAGTACCCTTTGATGTCTATAGCAAAAATGAGAAA
CTTGTCCGCGCGATCGAATCGTCAAAAGTCCTCAATTATCAATTCCAGTTGAATAAGGAA
CTTGACCCTTCTCTCAAATGGCAGTATTTTGGATCAACAAGCGGGTTTCTTCGGATTTAC
CCTGGGTTTCAATGGAAGGTCCAGACCAATGATGGTCACGCAAATATTTATGACTGTCGG
AAGAGAATGTGGTACACTGAGGCGGCCTCGTTTCCAAAAGATGTTTTGATCCTGGTAGAC
ATGAGTGGAAGCATGAAGGGATTGAAGATGTCCATTGCAACACATGTCGTCTCTACGATT
CTTGAAACTCTCAATGATAATGACTTCTTCAACGTGTTGTCGTTCAACAAATCTGTGGAA
TATGTTGATTCTTGCCTCACTGACACGCTCTTTCCCGCCACATCACGTCATAAGAAGAAA
GTCTTTGAAAGTTTAAAGCAGAGGGAACCGAATGAAATCGCAGAACTTGGAACTGCTTTG
GAATTCGCTTTGAAGAGCGTTGTGAAGTTTCAAAGCGTTGGAATGGGGAGTGCCTGTTAT
TCTGCTATCATGATTATCACAGACGGTTCGGCTGACAATTACCAACAAATCATCGAAAAG
AGTTTGAACAACACAAATAACCAGATTAGAATCTTCACCTATGTTGTTGGGAGGGAGAGC
AACTCTTACATGAAAGCTGTGGAGGAGATTGCATGTAACAATGCTGGATATTTCCATCAG
ATTGAATCGAAGAATGATGCGTATGAAAAAGTATTTCAATACTTAACTGTGATGAATCGT
CCACAGGCAGTCAACGATGACCACCAGACAATCTGGACAAAGTCATACTACGACACGACA
CAAGGAGACGATGGATTCGGTTTGGTTTTCACCCTTGCAATCCCAACTTATCTCAAAGAC
GCTCCGTCGACACTACTGGGAGTCATGGCAACCGATATACCTGTAAATCAAATCTTAGAC
GTGATTTCGATTCATAAGGCTGGTGTGAATGCTTTCGTCTTCATGATAACGAATAATGGC
AATGTTGTGTTTCATCCACGACTGATTACGAAGTTTACCGACAATTACAACAGACAGACA
ATAAAGGAAAACTACAACAGCATAGACATTGGGGATTTGGAAGCGCAGGACAGCAATGCA
ACATTACGCAATGCGTTGATTCAACAAGCAACCGCTGGATTGATAAAATCACCGAAAGTT
TTGACGTCGAGGGGAGACTGGAAACGACCGGTTTTTCAAAGTGGAACATTTCATCATTCA
CCTGTGTTTGGGACACCATATTCGATTGGCGTTTTCATTCCAGATGGATACGGAAACCAG
AAGTTGACGTACGGCAATAACTTGAAGATGCTCCGACATGGCGTAACGTATTCCGAGACT
GAATGTGACACTGTTAACGAACATTTGATGAAAAACAACCACAGGATAATTAACCGTGTC
TCAGCTGCATGCTCGTTAAACTTCAGTGATGTCACACTCCCAGATTCCTGGCACTTTTGT
CATTACCTTGATGGCCGTGATCAGAACACAGACCTCTCAATTTCCCAACTTGACCTAATG
CTCAAATTTGTCCTCACTGATGAAGCATCAACGATTAAATGTGACGGAGATTTGGTAAAT
AGTGTGTTGTTTGACTCGTACATCACATCAGCGCTTCATCCACTCTGGGCGGAACACAGC
AAGTACAATAGCACACATCAAGAAGGCATTCAATTGACTTTCATCACCACTAGAAGTGGA
GTGACCAGACAGTTTTGGCACGAAGATGACAGTTCTTCCCGTATAGTTGTACGAAGGTTG
CTTGGCGGTTTCGGAAAGCAAACCTTCCCGGATTTCTATCGACGGGCAGCGTCGTACCCT
GACAATCAATGGGTATATACTCCACTCCCTACTGACAACTACTGGAAGAAGAATAATGCG
ATTCTTGTCACCAGAGCATTGAAGCTGAAGAGTGCTATACTTGGAGTTGTCGGAATGCTG
ATTAAATATCAAGAGTTTTCGACTTCTTTCTGGGAACAACTTTCAGTCAACGAAGGCGTC
GGATGTTCTTTGACTGGCAATTCCGATTTCGATTGTTACGTCATCGATGATTACGGAAGA
ATTGTCATCAGCAATGAGCTATCACAAAGCAAAGTTGGCGAATTTATTGGAGATTATGAG
GGAGGTGCCACGCGACATCTGGTGGATGAAAACATATTCAGCATTACACACATAAATGAT
AACGGGACAGTTTGTCCGGAGACAGAACCAAAGGCTTCTGCCATGACTGGTAGTGGAGTG
TCTACGTTTCTTTCTCACCCCTTTCGGAAAGTTTGGTCTTACACATTTATCGCCGCAAAG
AGTTTGTCTCTTGTGCTGATGCAAGTCATGTGGTCGTTATTTTCAACAAGACAGAAAGTT
GAAGCACAATCACTTGAGCCAATCTACAGAATTTGCGATATATCTTATCCAATAGCCAGT
GTGAATAGGTCGAATGTACCGTATACCGGCTCGTTTACGTGTGTTGGTTTCGACCAAACC
ATATGCCTACGGGAAATTGGCTTCTATGGGATTGCCAATAGCAATCTTTTTATGTTCGTG
GTTGAGAAAGATAATCAAAGTTGTGTTTGTCAAAATGACACAGGAGGTTTTTATTTGACG
CCAAAGAAGCGGATTTATCAAGACAAAGTCCAGTGCGATTCACTCCGTAAAACACAACCA
CGTAGAAGGCCTGTTGGCTGTAAAGAACATCATTATACGACAGATGTAGATGTTGGCTAT
AATTACGCATGTTCCAATTCCAAGTCTGCTGCTTCTGGATTAGTGGCACAATCTTGGTCG
GGAGTGACTAAAAATTCACAGAAAGGATCTTCAGCGTCATACTTTCTCCTCAGTATTTCG
TGGTTTCTCCCATACTTATTAGTTTCAATGATTTCGTCCTTCAATGAAGACTTTTTCAAC
CCGTCAACCCTCATAAATTCATGACGAAAAAACAAACAATATTAACACATCTTATAAGAT
GGCTATTTACCACTAGAGGTGCTATATCCTAACCATCTATGCAAACTTCAAAACTACAGT
TATATTTGTCATTCATGTGGCATTGTGGCATGAACCTGAATATAACCAAATTAAAGTTAT
TATATTTTATAATAAAAATTATAATCCTATCGTTATCATCTGTTCGTTCCACCATCGTGG
| Pfam |
VWA_N (IPR013608) - T[138-245] 1.8E-25 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[272-456] 5.56E-21 |
| SMART |
VWF_A (IPR002035) - T[272-456] 9.5E-16 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[273-456] 1.5E-23 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[274-455] 16.645 |
| Pfam |
VWF_A (IPR002035) - T[274-439] 1.7E-16 |
| Pfam |
VDCC_a2/dsu (IPR013680) - T[698-1111] 7.1E-21 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CA2D1_HUMAN | 25.519 % | 280 | 1.53E-78 |
| CA2D4_HUMAN | 29.653 % | 453 | 2.16E-140 |
| CA2D3_HUMAN | 31.066 % | 511 | 9.77E-163 |