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TRANSCRIPT CARD

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  1. Transcript 'Moocul.CG.ELv1_2.S11...' > 
  2. Transcript 'Moocul.CG.ELv1_2.S10...' > 
  3. Transcript 'KH2012:KH.C3.424.v1....' > 
  4. Transcript 'Moocul.CG.ELv1_2.S23...' > 
  5. Transcript 'Mooccu.CG.ELv1_2.S71...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S712676.g46078.01.t

Possible name(s)

SDC1; SDC2; SDC4

Gene model

Mooccu.CG.ELv1_2.S712676.g46078

Location

S712676 [8,589 / 14,579]

Sequences

Amino acid sequence

Length: 180

>Mooccu.CG.ELv1_2.S712676.g46078.01.p
RMMKKFLRVLVTQIPSYFPTDDEDGIDDEDYSGSGEGIIAGVITDEIEEETTPEITEEPE
VNENKPAVIKEGSQKEKVKTPRKQPEVEVEIDEIDIEITDDVEIVDDDPIIKESNSGLLD
NKHFIAAVIIGGCIGLLCTIAVIMLLVYRMRKKDEGSYALDDKNTNFEYTKGLSKEYHV*

Nucleotide sequence

Length: 783

>Mooccu.CG.ELv1_2.S712676.g46078.01.t
AGAATGATGAAGAAATTTTTGAGGGTTCTGGTGACGCAGATACCATCTTACTTTCCCACT
GACGATGAAGATGGTATAGATGATGAAGACTATTCCGGATCAGGGGAAGGCATCATCGCT
GGCGTTATTACAGATGAAATTGAAGAAGAAACCACACCAGAAATAACGGAGGAACCCGAA
GTTAATGAGAACAAACCAGCGGTTATAAAGGAGGGTTCACAAAAAGAGAAAGTAAAAACA
CCAAGAAAACAACCAGAAGTTGAAGTGGAGATCGACGAAATTGACATTGAAATAACAGAT
GATGTCGAAATTGTGGATGACGATCCGATTATCAAAGAATCAAACAGTGGTTTGCTTGAT
AACAAGCACTTCATCGCAGCCGTAATCATCGGCGGTTGTATCGGACTTCTCTGTACAATC
GCCGTTATTATGTTGCTTGTGTACAGGATGAGGAAGAAGGACGAAGGCAGCTATGCTCTC
GATGATAAGAACACGAACTTTGAGTACACAAAAGGCTTAAGTAAAGAATACCATGTATAA
GAAACAAACACATGAATGACTGGAATATGTCTTCATATTAAAGGCCTTGTCCACATTGGT
CTTGTGAAGATGTATATTTAGTATTATATTTATTATAATACTGCGCTGTACAAATTTACA
TCGTCACTTTCTTTTATCTCAAAAACAATGGTACATTATTCCACGGTAATGTGATATTGT
TATGTCGCTGATTTTTGCTACCTACCTTTTATTTTTACTTCTCTTTCTCATATTAAGATT
TNN

InterProScan

PANTHER
Syndecan (IPR001050) - T[21-177] 4.1E-27
Pfam
Syndecan/Neurexin_dom (IPR027789) - T[118-177] 4.0E-23
ProSitePatterns
Syndecan_CS (IPR030479) - T[148-158] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value