- Clone 'cima037p20' >
- Clone 'cihA1J21T' >
- Transcript 'Mooccu.CG.ELv1_2.S65...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S659797.g40545.02.t
Possible name(s)
COL7A1; FN1; TNN
Gene model
Location
S659797 [840 / 4,440]
Amino acid sequence
Length: 570
>Mooccu.CG.ELv1_2.S659797.g40545.02.p
TIPSPMQNATRKSKDPYIWLEGLSPDTTYDIRVQAENGNERSRSVTIKQKTALGSPLNLV
IADGQLTDSMVTVTWDKMRNAKSYYVSIMSYDNKFGATDERLDNSFTAKGLQGTTEYKIS
VLGRNDIGDGRPATIGITTLIPAPTNLRIHGKSVDADQVQITWEQYHGATGYMLIVLPPA
GIRGAGRLKDNNAMIYGLKSSVKYEIFVCVLVGPEQGMNATTTFVTGLQAPDNFRTVKNE
VTDRSIMVEWDVVVLAEYYKVTYKPKGALKKMEINEIYNTSVVIQNLRPKTEYVISLQSM
EKAKSATGGLEEASMATTINVLTRVTPPGGLRVIDKTEDTATVSWLPVESALSYQVHVIP
NEGVIGTGNHTLPQAKLSNLTAPEYTVYVFGMDNEMNISSFASEITLKPGVDEVPMSSST
TIDPFDYGGFGIGGGNYGNGNTDQNGGNGASNTGDSSVEEKSLVGKPWVIIVIIVAAILI
IIIFAIIPCICDCCRNKALIKYHGCCGCCASCSDYGCCACRGCCPGGQIRQGMLERNQSY
ASTVVEQPRRLKSSGFGNRNISYTVQSNY*
Nucleotide sequence
Length: 1,789
>Mooccu.CG.ELv1_2.S659797.g40545.02.t
aCGATTCCATCCCCGATGCAAAATGCAACACGTAAGAGCAAAGATCCATACATTTGGCTG
GAAGGATTGTCACCTGACACAACCTACGATATTCGAGTGCAGGCAGAAAACGGAAACGAA
AGAAGTAGATCGGTCACCATCAAACAGAAAACTGCTCTGGGTTCACCATTAAACTTGGTA
ATTGCGGACGGTCAGTTGACGGATAGTATGGTAACCGTGACATGGGACAAAATGAGGAAT
GCCAAATCATATTATGTTTCCATAATGTCATATGATAACAAGTTTGGAGCTACGGATGAA
AGACTGGACAATTCATTTACAGCTAAAGGATTGCAAGGAACCACCGAATACAAAATATCA
GTGCTTGGGCGTAATGATATTGGAGACGGCCGACCAGCAACTATTGGGATTACTACATTA
ATTCCCGCACCAACTAATCTACGAATTCATGGGAAGAGTGTTGATGCTGATCAAGTACAG
ATCACATGGGAGCAGTATCATGGTGCCACAGGCTATATGTTAATTGTGTTGCCTCCTGCA
GGAATTCGAGGTGCTGGAAGACTCAAGGATAACAACGCTATGATTTATGGTTTGAAGTCC
AGCGTTAAGTACGAGATATTTGTTTGCGTTCTTGTTGGACCGGAACAAGGTATGAACGCT
ACGACAACTTTCGTAACTGGATTGCAGGCGCCGGACAATTTCCGAACGGTCAAAAATGAA
GTGACTGACCGAAGTATCATGGTTGAATGGGATGTGGTCGTTCTGGCAGAGTATTACAAA
GTCACATACAAACCAAAGGGAGCTTTGAAGAAAATGGAAATCAATGAAATTTACAATACT
TCAGTGGTCATTCAAAACTTACGACCGAAAACTGAATATGTCATCTCCTTGCAGTCTATG
GAGAAGGCGAAAAGCGCAACTGGTGGTTTGGAAGAAGCATCAATGGCGACAACAATCAAT
GTTTTAACAAGAGTCACACCACCTGGTGGTTTGAGAGTGATTGATAAGACGGAAGACACA
GCAACCGTTTCGTGGTTACCAGTAGAATCTGCTTTGAGTTACCAAGTTCATGTTATTCCA
AACGAAGGAGTGATAGGAACAGGAAACCATACATTACCACAAGCAAAATTAAGCAATCTG
ACAGCACCAGAGTACACAGTTTATGTGTTCGGAATGGATAATGAAATGAACATAAGTAGT
TTTGCTTCAGAAATCACTCTGAAACCTGGAGTTGATGAAGTTCCAATGTCGTCTTCCACA
ACGATAGATCCTTTTGACTACGGAGGGTTTGGTATTGGTGGTGGAAATTACGGCAATGGC
AACACTGATCAAAATGGTGGAAATGGAGCAAGCAACACTGGTGACAGTTCAGTGGAGGAA
AAATCACTCGTTGGCAAGCCATGGGTGATAATAGTCATCATCGTAGCAGCCATTCTGATT
ATAATCATATTTGCAATTATTCCATGCATATGTGACTGCTGCAGAAATAAAGCACTCATA
AAATACCATGGATGTTGTGGTTGTTGTGCAAGTTGTAGTGACTATGGATGTTGTGCCTGT
AGGGGCTGCTGTCCTGGAGGGCAAATAAGACAAGGAATGTTGGAAAGAAACCAATCTTAT
GCTTCCACAGTTGTCGAACAACCTCGTCGATTGAAAAGTTCTGGTTTTGGTAATCGTAAT
ATTTCATACACTGTGCAAAGCAATTATTAATTAGTATTAGAAAATTTAAAGTGTCTTATT
TTATGAATTGCATAGATATGAATTGCAAAATGTTTATATTGTTGTCATG
| ProSiteProfiles |
FN3_dom (IPR003961) - T[1-54] 9.373 - T[55-144] 9.831 - T[230-329] 11.835 |
| Gene3D |
Ig-like_fold (IPR013783) - T[3-52] 7.7E-7 - T[53-140] 9.8E-9 - T[141-228] 2.4E-5 - T[229-320] 6.1E-9 - T[322-408] 4.1E-5 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[14-139] 1.17E-13 - T[139-226] 4.43E-7 - T[240-392] 2.17E-12 |
| CDD |
FN3_dom (IPR003961) - T[20-49] 0.00342026 - T[54-139] 1.72394E-4 - T[230-298] 2.30363E-6 - T[327-408] 5.03767E-5 |
| SMART |
FN3_dom (IPR003961) - T[53-130] 6.5E-4 - T[141-217] 5.7 - T[231-305] 0.089 - T[325-399] 1.4E-4 |
| Pfam |
FN3_dom (IPR003961) - T[239-302] 3.5E-7 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TENN_HUMAN | 27.02 % | 95.9 | 1.71E-20 |
| FINC_HUMAN | 24.88 % | 100 | 7.78E-22 |
| CO7A1_HUMAN | 26.816 % | 97.1 | 8.48E-21 |