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  1. Transcript 'KH2012:KH.C2.335.v1....' > 
  2. Transcript 'Cisavi.CG.ENS81.R268...' > 
  3. Transcript 'KH2012:KH.C2.335.v1....' > 
  4. Transcript 'Boleac.CG.SB_v3.S403...' > 
  5. Transcript 'Mooccu.CG.ELv1_2.S65...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S654273.g40020.01.t

Possible name(s)

GAPVD1; RABGEF1; RIN2

Gene model

Mooccu.CG.ELv1_2.S654273.g40020

Location

S654273 [10,501 / 17,350]

Sequences

Amino acid sequence

Length: 325

>Mooccu.CG.ELv1_2.S654273.g40020.01.p
MHLKATHRIKTRKKSWIIEKFLMTRLYRNIFCNEQTEDEQQDLALQAKIRSLHWVTTAML
DAEFIESKSSVAIAIEKAITAIIEMDSKRAPQDKLTCITRCSKHIFEGLQESKGVAASAD
EFLPALIYIVLKANPPLLKSNIHYITRFSNPSRLQAGEDAYYFTNLCCAAEFIETGLNAA
SLSLTSEEYDAYMDGRIPRSKNIFDGPRLSENGRNTCPGLELMYRNLNELASLHKRVDNL
FSEAVEIQKKMELHSDFLTQEVDKELNKTYTNADGWEVIAETSTSKDAIANSNQPPNHST
VSAMDMEIADALPPPLLPVQAAQL*

Nucleotide sequence

Length: 1,748

>Mooccu.CG.ELv1_2.S654273.g40020.01.t
NNGATGAAGTGACTTCACCATCAAACCAACAACAAACATCCCCAAATCAAACCAGAAAAC
ATTCACCCAACACTCTTCGTAGAATATTAAAGTCAAAAAGTCATGATTTTCCGTGGCCGA
CACCAGAACGTCAACAGAGTTATGAAAGCCGACAAGCATCGCAAGATTTCATTGAGTTTA
TAAAAACATTCAATGAACCTGCAGCCAAAGATGTGACTAACCAATGCAAAACATTCATGG
AAAAGCTTATTGATAATAAGCACTTGAAAATCGAGGTACAATCTGAATTGGTACAGGATT
TTTACCACGATATGTCGAATCGACTTATTTCACATCATGCATTTAAAAGCTACACATCGG
ATAAAGACCAGGAAGAAATCATGGATAATAGAGAAGTTTCTGATGACGCGACTTTATAGA
AATATATTTTGTAACGAACAAACGGAGGACGAACAGCAAGACTTGGCTTTACAGGCGAAA
ATTCGGAGCTTGCATTGGGTGACAACGGCCATGTTGGATGCAGAATTCATCGAAAGTAAA
TCATCAGTAGCTATCGCTATCGAAAAGGCTATCACAGCAATTATTGAAATGGATTCGAAG
CGAGCGCCACAGGACAAATTAACCTGCATTACAAGATGTAGCAAACATATATTCGAAGGA
CTTCAAGAGTCTAAAGGTGTTGCTGCAAGCGCAGATGAATTTTTACCAGCGTTAATCTAC
ATCGTATTAAAGGCAAATCCACCTTTACTGAAATCCAACATTCACTATATCACAAGGTTT
TCAAACCCAAGTCGACTACAAGCTGGAGAAGATGCATATTATTTTACTAACTTGTGTTGT
GCGGCGGAATTTATTGAAACTGGTTTAAACGCAGCAAGTTTATCGTTAACATCTGAAGAG
TACGATGCTTACATGGACGGGAGGATACCAAGGTCAAAGAACATATTCGACGGTCCACGA
TTATCGGAAAATGGCAGGAATACATGTCCCGGTCTCGAACTTATGTACAGAAATTTAAAT
GAATTAGCGTCGTTACACAAAAGGGTTGATAACCTTTTCTCAGAAGCCGTTGAAATTCAA
AAGAAAATGGAACTTCATTCTGACTTTTTAACACAAGAAGTAGACAAGGAATTAAACAAG
ACATACACAAATGCTGATGGTTGGGAAGTCATAGCAGAAACCAGCACTTCAAAAGATGCT
ATTGCTAATAGCAACCAACCACCCAATCATAGCACAGTATCTGCAATGGACATGGAAATT
GCCGATGCATTACCACCCCCTCTATTACCCGTCCAAGCCGCACAACTCTAATCTTCCAAG
TTACGCCAGGCACCCCTCCCTCATTCCCCCACCTCAACTTGACATCTATATCCAGCAATT
ATCATGAAAGTATACTTCAAATGTTTATCTATACTCCTACAATACGCCAATTGTAATGAT
TTATTTGCCTTTTATTTTATTTTTCAATAATACATCTAAATAATATATTATTCTTCATGT
TCTAAACAGTATGCTAGCAAATTTTTCCAAGATGATTGTATTTCTGTTGCTGTGCATTGT
CACTACGCTCCTGCTCGAGATCAAAATTGAATAGCTAATCCTATGGTTATTATTCTGACT
TAGAACCACTGAATAAAACCACCCATTACGGAAATGTGCCATTAAGTAATCTTCTAGTAG
TTTAGAAATCATCTTATTAATGTTGACATGCACTTCTTCAACAAGGTGCTGGAGTTCTGA
TGTTTTGT

InterProScan

SUPERFAMILY
VPS9_dom_sf (IPR037191) - T[125-306] 8.11E-52
Gene3D
VPS9_dom_sf (IPR037191) - T[147-315] 7.2E-60
ProSiteProfiles
VPS9 (IPR003123) - T[151-294] 35.14
SMART
VPS9 (IPR003123) - T[184-303] 3.1E-20
Pfam
VPS9 (IPR003123) - T[188-287] 6.9E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RABX5_HUMAN 46.732 % 259 7.42E-81