Aniseed - Transcript Card

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S559363.g34157.01.t

Possible name(s)

SNX1; SNX30; SNX4

Gene model

Mooccu.CG.ELv1_2.S559363.g34157

Location

S559363 [937 / 2,391]

Sequences

Amino acid sequence

Length: 130

>Mooccu.CG.ELv1_2.S559363.g34157.01.p
MPPLPEKRANFVWTKISTDTFDQEFLERRRSGLETFLHRVSSREKLSRDTILLKFLRQEQ
SWKETVLATGYQAKSDSWLRTVNASWRVKKPDQGIEDLRLYANELHKNISTVLQARAKLV
DRIYAINKIH

Nucleotide sequence

Length: 554

>Mooccu.CG.ELv1_2.S559363.g34157.01.t
TATATTGTTTCTTTGCAAACGCGATCTAGTATGGCAGTTGACAAAGACCAAGCCTGGTAA
TAGCCACATTGTCACACTAGTAGCCATCTTTGTTACATTCACAGATACAGTGAGTTTGAG
TTGCTCCGAAACTATCTCTTGGTCAACTATCCAGCAGTGGTCATGCCACCACTTCCTGAA
AAACGTGCAAATTTTGTCTGGACGAAAATCTCCACTGATACATTCGATCAAGAGTTTCTT
GAAAGAAGACGCTCAGGTTTGGAAACATTTCTTCATCGCGTATCTTCTCGTGAGAAGTTG
AGCAGAGATACGATCCTGTTAAAGTTCCTTCGACAGGAACAAAGTTGGAAGGAAACTGTT
CTTGCAACCGGATATCAGGCAAAGTCGGATTCATGGCTGCGAACTGTCAATGCTTCATGG
AGGGTAAAGAAACCTGATCAAGGAATTGAAGATCTTCGTTTGTATGCCAACGAACTTCAT
AAGAATATTTCAACTGTGTTGCAAGCACGTGCTAAACTTGTTGACAGAATCTACGCCATC
AACAAAATACATGG

InterProScan

ProSiteProfiles	Phox (IPR001683) - T[1-117] 16.91
Gene3D	PX_dom_sf (IPR036871) - T[1-137] 2.5E-24
SMART	Phox (IPR001683) - T[3-113] 7.1E-14
Pfam	Phox (IPR001683) - T[14-112] 1.0E-16
SUPERFAMILY	PX_dom_sf (IPR036871) - T[26-113] 2.22E-19
PANTHER	SNX4 (IPR034783) - T[31-184] 1.1E-57

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SNX4_HUMAN	53.077 %	147	1.14E-43