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- Transcript 'Mooccu.CG.ELv1_2.S55...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S554688.g33449.02.t
Possible name(s)
KCNQ1; KCNQ3; KCNQ4
Gene model
Location
S554688 [10,705 / 24,547]
Amino acid sequence
Length: 568
>Mooccu.CG.ELv1_2.S554688.g33449.02.p
MDKIPSPMSPIDITDPFDESQTTISKTMSQREDSKDMSIFDTEFSQSSNVFVSEKCNNNA
TNCDNRSLLTPSYVIKTERSSLNTTTENDEVASDSFSFPLTSTKYYPPDESQSEWRYSTL
CEYLRERDDSNIRIESNTHKHRAPSWKRKLQTNCYGFLEKPTGIKCFIYHMIVFTLVLVC
LTFSVLSTVEGREKEIVVVSFFGIEYLVRLWSAGCVSKFKGFRGRIRFARKPICLIDLFV
VVASTIVLLVGRNGNVFATSAIRGIRFLQILRMLHMDRQAGTWRLLGSVVYMHRQELITT
LYIGFLALIFSSYFVYLAEKPSNVEVNITITNTTKLNRTDSDFHSFADALWWGVITVTTI
GYGDFVPKTWLGKLIASGFSIFAISFFALPAGILGSGFALKVQLKQRQKQMNRQIPAAAR
VIQAGWRCHCVHKNINSTATWKIYKLPKRMNQIEDEMMKNHKNNTILSDAPNASAMIKEG
TSEGRKTRKSSMNSWKEVIDEVTRASKFKSKSKYKYPAAYVNVVRCTRILIFQLRKRQFQ
VTIIKLNFARLYRLFTHLIRQAENRTM*
Nucleotide sequence
Length: 3,087
>Mooccu.CG.ELv1_2.S554688.g33449.02.t
AGAAAAATTATCTCTTCATCACGATATTTCTGTAACACACAAAGTATGGAACTGAGTAGA
ACGAAAATGTGTTAGCATATAAATTTGGTTAAAGAAATGGACAAAATTCCGTCCCCAATG
TCACCCATTGACATCACAGATCCTTTTGACGAATCTCAGACGACAATATCAAAAACAATG
TCTCAGAGAGAAGATTCGAAAGACATGTCAATCTTTGATACCGAATTTTCACAATCATCA
AATGTATTTGTTTCCGAGAAGTGCAATAACAATGCAACAAATTGCGACAATCGTTCATTA
TTGACACCAAGCTACGTCATAAAGACTGaaagatcaagtttaaatacaacaactgaaaat
gatgaagttgcgtCGGACAGTTTCAGTTTTCCATTGACTTCAACAAAGTATTATCCACCG
GATGAATCCCAAAGCGAATGGAGATATTCCACACTGTGCGAATATTTACGGGAGCGAGAT
GATAGCAATATCCGCATTGAAAGCAATACACACAAACATCGTGCTCCATCTTGGAAGCGG
AAACTTCAAACGAACTGTTACGGATTCCTCGAAAAACCAACCGGAATAAAATGTTTTATT
TATCATATGATAGTGTTCACTCTGGTCCTTGTGTGCTTAACTTTTAGTGTTCTCTCAACC
GTGGAAGGGCGGGAAAAGGAAATTGTCGTTGTGAGCTTCTTTGGTATTGAGTATCTTGTA
CGGTTGTGGTCAGCAGGATGTGTCAGCAAGTTCAAAGGATTCAGAGGACGAATTCGATTT
GCACGAAAACCAATTTGTTTAATAGATTTGTTCGTGGTTGTGGCCTCAACAATCGTTCTT
CTGGTCGGAAGAAACGGAAATGTTTTTGCAACATCCGCGATAAGAGGAATTCGATTTCTT
CAAATTCTTCGGATGCTTCACATGGATCGACAAGCTGGCACGTGGCGTTTACTGGGCAGT
GTTGTGTACATGCATCGACAGGAGCTCATCACGACACTTTACATTGGTTTTCTGGCGTTG
ATCTTCTCCTCTTACTTTGTGTATTTGGCCGAAAAACCATCCAATGTTGAAGTTAACATC
ACAATCACAAACACAACCAAATTAAATCGAACGGATTCGGATTTTCATAGTTTTGCAGAT
GCACTTTGGTGGGGAGTGATCACAGTGACAACGATTGGCTATGGAGATTTCGTCCCAAAG
ACGTGGCTCGGCAAACTAATTGCATCTGGATTTTCTATTTTTGCGATTTCATTCTTTGCA
TTACCAGCTGGTATTCTTGGTTCAGGATTTGCTCTTAAAGTGCAGTTGAAGCAACGACAG
AAACAAATGAATCGACAAATACCTGCAGCAGCTCGTGTCATTCAGGCTGGGTGGAGGTGC
CATTGTGTCCACAAGAACATAAACAGCACTGCCACATGGAAAATATACAAATTGCCAAAA
CGTATGAATCAAATAGAAGATGAAATGATGAAAAATCACAAGAACAACACAATATTGAGT
GATGCTCCAAATGCATCCGCTATGATCAAAGAGGGAACTTCCGAAGGAAGGAAAACGCGT
AAAAGTTCAATGAACAGTTGGAAGGAAGTAATCGATGAAGTTACTCGAGCAAGCAAATTT
AAATCAAAATCTAAATACAAATATCCAGCGGCATACGTCAACGTGGTCCGTTGCACCAGG
ATATTAATATTTCAATTGAGAAAACGGCAGTTTCAGGTAACTATTATTAAATTAAATTTC
GCGCGGCTTTACCGCCTTTTTACACACTTGATTAGGCAAGCAGAAAACCGTACGATGTGA
ATGACGTCATAACACAATTTACACACGGTCACATTAACATGACAGTGCGAATCAAGGAAA
TGCAGAGACGATTGGATCAGACACTCGGAAAACCTGCCACTTTTTACGACGATGGAAATG
GAAGCAAACTGGCAACAACAGGCGAAAGGCTTCGAAGTTTAGAAGCGAAAGTGGATAGCA
TCGATTTGAAACTTGACGAAATATTAACACAAATTTTGCTTTTAAAACGCGAGAATGTTG
ATCGATAATTATTACGAAACAATCCATTAAGAATATTGTTATTGTTCCTTTAACTGTTCG
TCAACAATGTACTATTAATATGACATCTACTGAACCTAATAATATGCACTTTAAATATTA
GAGCTGAATTTTAAAAACTTTATTTTAAAGCAATGCTATAAAATGCCATTTATTTTGTAT
ATATAAATATTTATGCATAAAACAATAATATAAAAAAAAAATTAAAAGTTAAATAAGAAT
AGAAGAAGGCATAATATATAAAGTTAATCATATTCTAAAAGAACAATTCATTTTCCTTTA
TTACTACTTCTCAGACATGCTTGTGGAATATTTAATTTCTTTCTTAATTTTTCAGCTCTT
CCATAACACGAGAGGGCGGAATGGTGCTCTTTTAAACTTTCCCAACATGTTCCGAGATTG
TTCAATACTTCCACCACGTGGAAGCCATAGTCCTTTTCATTCTCGTGATGGGAGTACAGG
TTTTCAGCCATCTTCAACGCCTTTTCCAAAACTGTGATAGCTCTGTGGTAGTTTTCATCG
CCAGCCCATGCCATAGCAAGCAGCATAAGTGATGAAAGGGTTAATTCGTTGTCATGTTCT
TTAAAGCATATCTTTCTCATATGCAGTGATATTTCGAAACATATAACAGCTTTAAAATAC
AGTTTTTCGTCAATGCAGATTTTGCCAAGTCTGTCAATGGCTTCAGCACTATCAGTTCGT
GGGTTGTTTAATTGCATTTGAGCTTCCTTCATTGCGTCATTAAATGCTTCTTCGTGTACG
TAATTTAGTCTTTCCAATACACAGATAGCAGCTCTCTCCAGCTTTTCAATCAAAATTTTG
TTGTTGTAAAGATTCACGCTTAAATCTGGGATTCTCTTCTTGGACTTGTAATAAACCCAT
CTTTTCCAGTTCGTGGTGGTTTTGTCGGAGTTCAACTGATCTCCACTTCCGGTGATAAGA
TTTCCAGTTGACTTGACGACAACACTTTGAGGAATTGCATACTTTGCTTTTAACTTTTCG
ACTGGAAGCATATTTACAAACAATATT
| PANTHER |
VG_K_chnl (IPR028325) - T[156-546] 1.5E-158 |
| Pfam |
Ion_trans_dom (IPR005821) - T[198-431] 2.0E-21 |
| PRINTS |
VG_K_chnl (IPR028325) - T[225-248] 3.9E-11 - T[375-397] 3.9E-11 - T[404-430] 3.9E-11 |
| PRINTS |
K_chnl_volt-dep_KCNQ (IPR003937) - T[233-252] 5.3E-25 - T[253-272] 5.3E-25 - T[315-334] 5.3E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| KCNQ1_HUMAN | 67.097 % | 408 | 4.12E-135 |
| KCNQ4_HUMAN | 53.42 % | 334 | 1.53E-106 |
| KCNQ2_HUMAN | 45.619 % | 328 | 2.93E-102 |