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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S562...' > 
  2. Transcript 'Mooccu.CG.ELv1_2.S53...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S530216.g30081.01.t

Possible name(s)

RNF13; RNF167; ZNRF4

Gene model

Mooccu.CG.ELv1_2.S530216.g30081

Location

S530216 [10,944 / 18,891]

Sequences

Amino acid sequence

Length: 444

>Mooccu.CG.ELv1_2.S530216.g30081.01.p
MKTTPYPTRGDMGNITMPTFALIERGKCDFAIKVLNAQHAGFSAAIVYNDVSNMVLKMST
KLPAIAHEIYIPAVFVGLHSGKELNTSYLYNKPGGSYVRIVEGSFDPIQYYLVPFIIVIS
ICFLSLLLFMLVRCVRDRRRTRRNRLSLARLKQLPVKKFQKGDEYDVCAICLDEYEEGDK
LRILPCKHAYHCKCVDPWLTSSKRVCPLCKQKVLSDDESSDSDDDESEDERTPLVGSSAA
TSPNAANWATGFSRQNPIMRALRRNLRRNRLSSDETSTDTEGPDLIPNDQSPLIHHQQQS
AIMQAEPSDVFIQQNEMQQSEIAEAEPCCSYGNTSPIITRQQSDRSDDLMHTAEVYIVRT
NRQSNNSITVLTDEDVSPARSPSSSSGSCDYRSVTETSTLENTLKTSSDVGTSDEHFQSM
SSDDDDDIIVLTHGSHQSHSEEV*

Nucleotide sequence

Length: 1,958

>Mooccu.CG.ELv1_2.S530216.g30081.01.t
TTCGTTTAGTATAACTCGGTGAATGGAACACACGAATACGAAGATGTTGAAGCAGATTTT
GGTTCAGGGATCGTTGAAGGCGGATTGACGGGCGTTTTGGTGTTTGCGGATCCGTATGAT
GGATGCAGTAAGATGAAAACCACACCATATCCAACACGAGGTGACATGGGGAACATCACA
ATGCCAACATTTGCGCTTATAGAAAGAGGAAAATGTGATTTTGCAATCAAGGTATTGAAT
GCGCAACATGCAGGGTTTTCTGCGGCTATTGTTTACAATGATGTCTCAAATATGGTGTTA
AAGATGAGCACCAAACTACCCGCAATTGCACATGAAATTTACATTCCAGCAGTGTTTGTA
GGATTGCATTCTGGAAAAGAACTCAATACCTCATATCTTTATAATAAACCAGGCGGTTCG
TACGTACGTATCGTTGAAGGAAGTTTTGATCCGATTCAATATTATCTTGTTCCATTCATC
ATCGTCATATCGATCTGCTTTCTCTCACTTCTCTTGTTTATGTTGGTTCGATGTGTTCGA
GATCGTCGGCGCACACGAAGGAATCGATTATCGCTCGCTCGTTTGAAACAACTTCCAGTG
AAGAAGTTTCAGAAGGGTGATGAATACGATGTTTGTGCCATTTGCCTCGATGAATATGAG
GAAGGGGATAAACTACGAATACTCCCTTGCAAACATGCTTACCACTGCAAATGTGTGGAT
CCATGGTTAACAAGCAGCAAACGTGTTTGTCCGTTATGTAAACAGAAAGTGCTGAGCGAT
GACGAGAGCAGTGACAGCGATGATGATGAGAGTGAGGACGAGCGAACACCATTAGTCGGA
TCATCTGCAGCAACTTCTCCAAATGCAGCCAATTGGGCAACTGGATTTTCCCGCCAAAAC
CCGATCATGCGTGCACTTCGAAGAAATCTTCGTAGAAATCGACTATCTTCAGACGAAACC
TCAACAGATACTGAAGGTCCTGATTTGATTCCAAATGATCAATCTCCATTAATACATCAC
CAACAACAGTCTGCAATCATGCAAGCGGAACCATCAGATGTCTTCATTCAACAAAATGAA
ATGCAACAAAGTGAAATCGCGGAAGCAGAACCATGTTGTAGTTATGGAAACACAAGTCCA
ATAATTACGAGGCAACAAAGCGATCGTTCAGATGATCTGATGCACACCGCAGAAGTGTAC
ATTGTGAGGACAAATCGACAATCTAATAACTCCATTACAGTACTCACAGATGAGGATGTC
AGTCCGGCAAGGTCACCAAGTTCATCATCGGGTTCGTGCGACTACCGAAGCGTGACCGAG
ACAAGTACATTGGAGAACACCTTGAAGACATCTAGTGATGTTGGAACGAGCGATGAGCAT
TTCCAATCGATGTCCTCGGACGATGATGATGACATCATCGTGTTGACTCATGGTTCTCAT
CAAAGCCACTCGGAAGAAGTTTAGTGATAAAGTGAACTACATACGTTGAATTTTAGTGAT
GTAATAATTTTACATTTATGAAATTTCATCTTTCTATTTATGTAAATAGCTTGATTTTTA
TTTCCACCTTCCTTGCCAACCTCGATATCTCATACTTCGATAGATGAGTTATATTTTTAA
AATAATTGCAATCTTCAACATTTCAAGAATATTGCATAATTCTCTTCTGCAATCCGCCAA
TCAGTTTGATAAAAAGTTGATTTTTGATGACATAATGGTTTTATATTGTTTATGAAGAGT
GAGGTTTCATTTTAAAGCTTTTGTTGTTGGCAAATGTCTTAATTTTTGTTGTCAATTTCA
CCCAACATGCAATTTTAAGTTCCTTTAGTATGTTGCTTATCACCAGTTGCCTGTCAGTAG
GAACCAGGTGTGGTGTTTGTGACAGTACACATCTTTCCTATGCTCTCTGTATTATATTTC
GCAATTTTTAATAAATATATATTATACGAATATAAATC

InterProScan

Pfam
PA_domain (IPR003137) - T[30-128] 4.0E-9
Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[188-263] 8.6E-20
Pfam
Znf_RING (IPR001841) - T[211-254] 4.7E-13
ProSiteProfiles
Znf_RING (IPR001841) - T[212-254] 12.799
SMART
Znf_RING (IPR001841) - T[212-253] 3.4E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RNF13_HUMAN 55.67 % 219 1.45E-67
RN167_HUMAN 46.121 % 221 1.52E-68
ZNRF4_HUMAN 35.593 % 134 4.72E-35