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TRANSCRIPT CARD

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  1. Transcript 'Mooccu.CG.ELv1_2.S41...' > 
  2. Transcript 'Boleac.CG.SB_v3.S27....' > 
  3. Transcript 'Mooccu.CG.ELv1_2.S61...' > 
  4. Transcript 'Mooccu.CG.ELv1_2.S51...' > 
  5. Transcript 'Mooccu.CG.ELv1_2.S51...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S519575.g28770.03.t

Possible name(s)

NPC1; PTCHD3

Gene model

Mooccu.CG.ELv1_2.S519575.g28770

Location

S519575 [8,919 / 11,528]

Sequences

Amino acid sequence

Length: 303

>Mooccu.CG.ELv1_2.S519575.g28770.03.p
PGIALSASFGYLWSNLHFVIPLLLLGIGVDDMFIMLKAWNIVLADPRLQSLTIEQKSGTV
LKSAGVSITVTSITDLVVFAVGATSSMTVLQSFSLYTSLCILFLFLLQCTFYMSCIVLDQ
KRRDANRDACICCHKYDDSYKEGRCANRELLQWFFDNILGLVLEYKFVRFFVIVVSLAVA
GLMSWACYKLPSEFDSTYYIPSGSYVRDFITKDREYFTQGYGADVYVVSDDLYQERSKLV
QLQNTMLSNEGVNSEFIRSWYEAYENWSGKATVTTDEEFYADVSKFLNVTDGLQYKYVCC
GK*

Nucleotide sequence

Length: 1,918

>Mooccu.CG.ELv1_2.S519575.g28770.03.t
CCTGGAATAGCACTCAGTGCATCGTTTGGATATTTATGGAGTAATCTTCACTTTGTTATC
CCTCTTCTACTCCTGGGTATAGGAGTAGATGACATGTTTATTATGCTTAAAGCATGGAAC
ATTGTCCTTGCTGATCCGAGACTTCAATCTTTAACAATTGAACAAAAATCTGGAACAGTA
TTGAAAAGTGCTGGAGTTTCGATTACGGTTACATCAATTACAGACCTTGTGGTGTTCGCA
GTTGGCGCTACAAGTTCAATGACTGTTCTGCAAAGTTTCAGTTTATACACATCGTTATGC
ATACTTTTCCTCTTTCTGTTGCAGTGCACCTTTTACATGTCCTGCATCGTATTGGATCAA
AAACGACGTGATGCGAACAGAGATGCATGCATCTGCTGCCATAAATACGACGATAGTTAT
AAGGAAGGACGATGTGCTAATCGAGAGTTGCTTCAATGGTTCTTTGATAACATCCTGGGT
TTGGTGCTAGAGTACAAGTTTGTAAGATTTTTTGTGATTGTGGTTTCATTGGCTGTGGCT
GGACTGATGTCGTGGGCATGCTACAAACTTCCATCCGAATTTGATTCAACTTATTACATA
CCAAGTGGCAGTTATGTCCGAGACTTCATAACAAAGGATCGTGAGTATTTCACTCAAGGT
TATGGAGCAGATGTGTATGTTGTCAGTGACGATCTTTACCAAGAAAGAAGCAAGTTGGTT
CAACTGCAAAATACAATGCTCAGCAATGAAGGTGTCAATAGTGAATTTATCAGGAGTTGG
TACGAGGCATACGAAAATTGGTCGGGTAAAGCGACAGTAACCACCGATGAGGAATTTTAC
GCAGATGTCTCAAAGTTTCTTAATGTAACGGATGGATTGCAATACAAATATGTATGTTGT
GGTAAATGAGCTACTACTGTTTCAAACATCACTTTGTTGAGGATGTTGCATTTAACGACC
AACAAAAAATTATTGGCTGCAAACTTCCATTTCAACATGTTGATGATGACGTTGCTATGA
ACAATGTTCGACATATGAACAGCATCCAAAAAGATGTAAAAGCTATCAATTTTAGCAAGG
ATGCATTCGCCTTTTCAGAGGGCTATTACATACTGGAACTGACTGAATTGATAGACAACG
AAGTATATCGAAGCCTTGCTATTTCAATCGCTGCAGTATTCCTACTTGTTTTGACGACAT
TGGCAAATTTACAAATGGCATTTTGGGTTGCCCTTTCTGTTGTAATGACAATGGTAGAAG
TGGCTGGGTGCATGTATTTTGCTGATATATACATCGAAACAACGCTGGAAATTGTCCTAA
TTCTGTCAGTAGGACTCGCTATTGATTATGCTGCCCATGTGGGGCACAAGTTCCTAACTT
TAAAAGGAACACGAGAAGTGCGTGTTCGTACAACTTTGAGCCATGTAGGACCAGCTGTAT
TCAATGGAGGATTTAGCACGTTTTTAGCGTTGGTTGCATTTTCAATTTCTTCCATCTACG
CATACAAAGTGTTTTTTACGGCGTTTGTGTGTGTGATCAGTTTTGGCTTATGGAACGGTT
TGGTCTTTCTTCCGAGCATACTCGCATTTATTGGGCCATCACCATATAACACCGCCACGG
AAATATTTGTGGATGGGAGATTACAAGACAAGAAAATTTTAGGCCAATTTTTAAAGAATC
CTAAAAAGATCTCAATGCAAAGAACATAAGTTATAGGCTACACTGACTGAATGAATTCCT
GATGAAGGGCGCGAGCCCGAAAGCTCGAATCTCAAAATTGTTATAATTTTTTTTTCTGCA
AAAGTTTTGGTAGTCGTCATCTGGCAGCATCACACATCAAATGTAGCCTACTGGACGAAT
GGCCTATATATATAATATTATATTAACAACTTCCTTTTATGATTTAGTGCCAAAAACG

InterProScan

ProSiteProfiles
SSD (IPR000731) - T[1-118] 25.483
Pfam
Ptc/Disp (IPR003392) - T[8-297] 3.4E-32

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NPC1_HUMAN 30.38 % 101 6.16E-24