- Transcript 'KH2012:KH.C7.696.v1....' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'Mooccu.CG.ELv1_2.S51...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S511260.g27811.01.t
Possible name(s)
MATN2; MATN3; MATN4
Gene model
Location
S511260 [5,314 / 8,419]
Amino acid sequence
Length: 878
>Mooccu.CG.ELv1_2.S511260.g27811.01.p
LVLRCASQLDVVFLVDSSSSVKEENFDIMRGFIVNVVRQLDISPELSQVSLARYNSWTEP
VFHFNTYANKRDVIEAIRAVPYYGRGTMTAEGLRVVSDQLLRRHKGWRENDVPTVVIVLT
DGRAKDADMIPRMARRLRRKVTRVIAVGIGRVDEEELKLIASRPATDNVIMVQEFSELVG
LVLDVADKTCEVAGDENECKDNNGDCEVNCVNVLNGWYCECPVGYNIVDDRNCADINECA
VDNGGCSDVCENTEGSYECRCDVGFVVGPNKNCEPDSCFGNSGCQQVCNNIIGGDFSCSC
NAGFQLNEDGRSCSDINECEINNGGCEYTCNNTFGGYDCLCPEGLGLRDDKHTCGIICFV
CDRALSNEDCQEEVVCPMSEKSCQTHVRSENGVVYISKMCKQTEACVNNFVQNPRTAWSP
TQCNENPSGTVSVCRCCCHESYCNAPADCSLSDKIDIECEDPSFIETPRDMNISCSGNQI
GDVCDLICPVGFAPVTGTTQLVCTHRPRSLEGDWVGEVGECGDVDECAINNGGCSHFCEN
TVGSFICSCPDDFKCALEKRDVLFILDSSSSVKDPNFALMRDFVSIIGNQMVIDQDGVRI
AAMRYNLNPEKLFGFDEVVDNQDFVTRVANIPYNGRGTYTARAIKAAVEDCLTIETGRRP
GVPLKVIIITDGRSKDRHDLPDALARLYQHTEDVFAIGVTNRVNEKQLLQIANERPTHYR
FVDDFSALDDALAMDYVEPRLCSDAEGRHVLQPDGLNCDINECLKNNGGCSHFCNNTIGS
FYCSCPEGSALIEDGLTCVFDECLEENGGCEYECLNTARGRVCLCPYNRQWDGEKCAGYN
ECLDENGGCSDICEDTDDGYVCRCPEGMDLGPDQHTCG
Nucleotide sequence
Length: 2,634
>Mooccu.CG.ELv1_2.S511260.g27811.01.t
TTAGTATTGAGATGCGCCTCACAATTGGACGTCGTCTTTTTGGTCGATTCTTCCAGTTCT
GTTAAAGAAGAAAATTTTGACATTATGCGTGGATTCATCGTTAATGTCGTTCGTCAACTC
GACATTTCACCAGAACTCTCACAAGTTTCATTAGCGCGTTACAACAGTTGGACAGAACCC
GTGTTCCATTTTAACACATATGCAAACAAGCGTGACGTCATCGAAGCCATCCGTGCCGTT
CCATACTATGGCCGAGGAACCATGACAGCTGAAGGTTTGAGAGTTGTTTCTGACCAACTC
CTCCGAAGACACAAAGGATGGAGAGAAAACGACGTCCCAACCGTCGTCATCGTCCTTACT
GACGGACGAGCAAAGGACGCAGACATGATCCCAAGAATGGCACGACGACTTCGACGAAAG
GTCACTCGAGTTATTGCTGTCGGTATTGGACGAGTCGATGAAGAAGAATTGAAGTTGATC
GCTTCAAGACCAGCAACAGACAATGTCATCATGGTCCAAGAATTTAGCGAATTGGTCGGA
CTTGTCCTCGACGTTGCAGACAAGACATGTGAAGTAGCTGGTGATGAAAATGAATGCAAA
GACAACAACGGTGATTGCGAAGTCAACTGTGTCAATGTTTTGAACGGATGGTACTGCGAA
TGTCCAGTCGGATACAACATTGTAGATGACAGGAATTGCGCTGATATCAACGAATGTGCC
GTCGATAACGGTGGATGTTCTGATGTTTGCGAAAACACTGAAGGTTCATACGAATGCCGA
TGCGACGTAGGATTTGTTGTTGGTCCAAACAAGAACTGTGAACCAGACAGCTGTTTTGGA
AACTCTGGTTGCCAACAAGTCTGCAACAACATCATCGGAGGTGACTTTTCATGCAGTTGC
AATGCTGGATTCCAATTGAATGAAGATGGACGATCATGCTCTGACATCAACGAATGTGAA
ATTAACAACGGAGGGTGCGAATACACTTGCAACAACACCTTTGGAGGTTACGACTGTCTC
TGCCCAGAGGGTTTGGGTCTCCGTGATGACAAACACACTTGTGGCATCATCTGCTTTGTT
TGCGACCGAGCTTTGAGCAACGAAGACTGCCAAGAAGAAGTTGTCTGTCCAATGAGCGAG
AAATCTTGCCAAACTCATGTGAGAAGTGAAAATGGAGTTGTATACATCAGCAAGATGTGC
AAACAGACTGAAGCTTGTGTAAACAACTTTGTCCAAAACCCCAGAACTGCTTGGTCCCCA
ACACAATGTAACGAAAACCCTTCCGGAACTGTCTCAGTGTGTCGATGCTGTTGCCACGAA
TCATACTGTAACGCACCTGCAGATTGTTCTCTTTCCGATAAAATTGACATCGAATGTGAA
GATCCATCTTTCATTGAAACACCAAGAGACATGAACATCTCTTGCAGTGGCAACCAGATC
GGAGATGTCTGCGATTTGATCTGCCCTGTTGGATTTGCTCCAGTTACTGGTACCACACAG
CTCGTATGCACACACAGACCAAGAAGTCTTGAAGGCGATTGGGTTGGTGAGGTCGGCGAA
TGTGGCGACGTTGATGAGTGCGCCATCAACAACGGAGGATGCTCCCATTTTTGTGAAAAC
ACAGTTGGATCCTTCATCTGCTCATGCCCAGATGACTTCAAATGTGCATTGGAAAAGAGA
GATGTCCTCTTCATCTTGGACTCCTCTTCATCTGTCAAAGATCCCAACTTCGCTCTCATG
AGAGATTTCGTCAGCATCATCGGAAACCAGATGGTCATCGACCAAGATGGAGTCAGAATT
GCTGCCATGAGATACAATCTCAACCCAGAAAAACTTTTCGGATTCGATGAAGTCGTCGAC
AACCAAGACTTTGTCACCCGAGTTGCCAACATCCCATACAATGGACGAGGAACCTACACA
GCACGTGCCATCAAAGCTGCAGTCGAAGATTGCCTTACTATCGAAACCGGTCGACGACCA
GGAGTTCCACTTAAGGTTATCATCATTACTGACGGAAGAAGCAAGGATCGACATGACTTG
CCAGACGCTTTGGCTCGACTTTACCAACACACTGAAGATGTATTTGCTATTGGTGTCACT
AACCGAGTTAATGAAAAACAACTTCTTCAAATTGCCAACGAACGACCAACCCACTACAGA
TTCGTCGACGATTTCTCTGCACTTGACGATGCATTGGCCATGGACTACGTTGAACCAAGA
CTTTGCAGTGACGCAGAAGGTCGACATGTACTCCAACCTGATGGTCTTAACTGCGACATC
AACGAGTGCTTGAAGAACAACGGTGGATGCTCACACTTCTGTAACAACACCATTGGATCA
TTTTATTGCTCATGCCCAGAAGGATCTGCTCTTATCGAAGATGGTTTGACTTGCGTATTT
GATGAATGTCTTGAGGAAAACGGCGGATGCGAATATGAATGTTTGAACACTGCTCGTGGT
CGAGTCTGCCTCTGTCCATACAACAGACAATGGGATGGAGAGAAATGTGCTGGATACAAC
GAATGTTTGGATGAAAATGGTGGATGCTCAGACATCTGTGAAGATACTGATGATGGTTAC
GTTTGCCGATGTCCAGAAGGCATGGATTTGGGACCAGACCAACACACATGCGGT
| Gene3D |
vWFA_dom_sf (IPR036465) - T[3-198] 1.9E-48 - T[560-749] 3.1E-37 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[5-192] 5.19E-47 - T[530-732] 1.3E-39 |
| SMART |
VWF_A (IPR002035) - T[8-183] 2.3E-38 - T[559-740] 2.8E-24 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[10-185] 29.642 - T[561-737] 25.204 |
| Pfam |
VWF_A (IPR002035) - T[10-178] 1.6E-37 - T[561-730] 1.5E-29 |
| SUPERFAMILY |
Growth_fac_rcpt_cys_sf (IPR009030) - T[194-314] 6.59E-10 - T[756-877] 3.45E-10 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[195-234] 0.0028 - T[235-274] 8.0E-9 - T[276-314] 0.11 - T[315-355] 5.1E-4 - T[523-562] 1.1E-5 - T[759-799] 3.7E-8 - T[838-878] 0.1 |
| SMART |
EGF-like_dom (IPR000742) - T[198-234] 0.39 - T[238-274] 0.0034 - T[277-314] 0.2 - T[318-355] 0.84 - T[526-565] 1.5 - T[762-799] 0.0013 - T[802-837] 110.0 - T[841-878] 0.025 |
| Pfam |
EGF-like_Ca-bd_dom (IPR001881) - T[235-273] 7.9E-6 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[235-274] 9.047 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[250-261] . |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[259-273] . |
| Pfam |
cEGF (IPR026823) - T[296-318] 1.6E-9 |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[315-339] . - T[523-547] . |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[457-523] 7.868 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MATN2_HUMAN | 27.207 % | 265 | 2.88E-75 |
| MATN4_HUMAN | 33.523 % | 200 | 1.09E-54 |
| MATN3_HUMAN | 30.423 % | 181 | 2.65E-49 |