- Transcript 'Mooccu.CG.ELv1_2.S47...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S470673.g23903.01.t
Possible name(s)
SDHB
Gene model
Location
S470673 [1,742 / 2,896]
Amino acid sequence
Length: 275
>Mooccu.CG.ELv1_2.S470673.g23903.01.p
MALRLSRTVLRKPNEILKLAGQTILRASSSAAQTETQPRYKKFSIYRYDPEKKAYPKMET
FEVDLNDCGPMILDALIKIKNEDDPTLTFRRSCREGICGSCSMNIDGKNTLACLENINEN
TKKTTKIYPLPHMYVVKDLVPDMNNFYAQYRSIEPFLKQKDESKIGKENYQSEKDREKLD
GLYECILCACCSTSCPSYWWHSEKYLGPAVLMQAYRWIVDSRDEFASERLAKMNDPYTLY
KCHTIMNCTEACPKGLNPGLAIGELKKMVAMNKA*
Nucleotide sequence
Length: 932
>Mooccu.CG.ELv1_2.S470673.g23903.01.t
CTTTCTTTTCAGATTGATTAATCCAAATATATAGGCCTATTATAGTTTATTTTTAATTTT
TTCATAATGGCTCTTAGGTTATCTCGTACAGTGCTGCGAAAGCCTAATGAGATCCTGAAG
TTGGCTGGACAAACAATTTTGCGTGCATCAAGTTCAGCTGCTCAAACAGAAACCCAACCT
CGTTATAAAAAGTTCTCTATTTATCGCTATGACCCGGAGAAAAAAGCATATCCTAAAATG
GAAACCTTCGAAGTGGATCTTAACGATTGTGGTCCCATGATTTTGGACGCTCTCATTAAG
ATTAAGAATGAAGACGACCCTACTTTAACATTTCGACGATCGTGTAGAGAAGGCATCTGC
GGATCATGTTCAATGAACATTGATGGAAAGAATACCCTCGCCTGTCTTGAAAATATTAAC
GAAAACACAAAGAAAACCACAAAAATCTATCCGCTTCCGCATATGTACGTTGTTAAAGAT
TTGGTTCCGGACATGAACAACTTTTACGCTCAGTATCGTTCCATCGAACCTTTTCTTAAA
CAAAAAGACGAGAGTAAGATTGGAAAAGAAAACTACCAATCCGAGAAAGACCGTGAGAAG
TTGGATGGATTATATGAATGCATTCTGTGCGCTTGTTGCTCGACTTCATGTCCAAGCTAT
TGGTGGCATTCGGAGAAGTACCTTGGACCGGCAGTGCTGATGCAAGCATACCGATGGATC
GTGGACAGTCGGGATGAGTTTGCCTCCGAACGGCTGGCCAAGATGAACGATCCGTACACT
CTCTATAAGTGCCATACGATTATGAATTGTACCGAAGCGTGTCCCAAAGGATTGAACCCA
GGTTTAGCGATTGGAGAACTTAAGAAAATGGTTGCAATGAATAAGGCATAAGCATGCAAC
AGTGTATTTAAAAACGAGTTTCTTGTGTAAGT
| Gene3D |
Beta-grasp_dom_sf (IPR012675) - T[52-164] 1.5E-47 |
| SUPERFAMILY |
2Fe-2S_ferredoxin-like_sf (IPR036010) - T[61-164] 2.63E-30 |
| ProSiteProfiles |
2Fe-2S_ferredoxin-type (IPR001041) - T[63-155] 10.048 |
| Pfam |
Succ_DH/fum_Rdtase_N (IPR025192) - T[64-169] 3.6E-32 |
| TIGRFAM |
Succ_DH/fum_Rdtase_Fe-S (IPR004489) - T[67-288] 1.1E-82 |
| CDD |
2Fe-2S_ferredoxin-type (IPR001041) - T[78-128] 0.00112682 |
| ProSitePatterns |
2Fe2S_fd_BS (IPR006058) - T[115-123] . |
| Gene3D |
Helical_ferredxn (IPR009051) - T[165-300] 3.8E-59 |
| SUPERFAMILY |
Helical_ferredxn (IPR009051) - T[165-293] 1.48E-36 |
| ProSiteProfiles |
4Fe4S_Fe-S-bd (IPR017896) - T[197-227] 7.5 |
| ProSitePatterns |
4Fe4S_Fe_S_CS (IPR017900) - T[207-218] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SDHB_HUMAN | 68.364 % | 392 | 5.49E-139 |
