Aniseed - Transcript Card

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S426658.g20283.01.t

Possible name(s)

CUL9; RNF144A; RNF144B

Gene model

Mooccu.CG.ELv1_2.S426658.g20283

Location

S426658 [4,905 / 9,878]

Sequences

Amino acid sequence

Length: 255

>Mooccu.CG.ELv1_2.S426658.g20283.01.p
MFCPRVGCETVCHVCNRKKQKPQKQAAKPNINPVKVYCNKCELHFCSICKVEWSNDDHSC
VEITPSLSSEILKLQNRAGFALSTRSDPLIKRCPVCQVLIEKDRGCAQMICRSCSHVFCW
NCLKLLDNDFMLHHYDKGPCKNFLGHSRAQVMRHRLGVIGLFSAFTLLLIVASPVLILAA
PILLCCKCKDCCRKIWRRDDASVIDVPITTNNINQSTQTYHKVSKTSNQINVPADISMEE
GSVTSQSSTAELNK*

Nucleotide sequence

Length: 1,206

>Mooccu.CG.ELv1_2.S426658.g20283.01.t
TTTTCAATGACATCATTGGCATAAGTATAGAAGTGAAGTGGAGTGCATAATTTTACAAAG
TAGTTCTAAGTGGCAATTGATCCGCACCGAATGTTCTGTCCTCGTGTTGGTTGTGAGACC
GTATGTCACGTCTGTAATCGCAAGAAGCAGAAACCACAGAAGCAAGCAGCTAAACCAAAC
ATAAATCCTGTTAAAGTATATTGTAATAAGTGTGAACTTCACTTCTGCAGCATCTGTAAA
GTTGAATGGTCCAACGATGATCATTCATGCGTAGAAATAACACCGTCGCTAAGCAGTGAA
ATATTAAAACTACAAAATAGAGCAGGATTTGCTCTTAGCACACGTTCCGACCCATTGATT
AAACGATGTCCCGTCTGTCAAGTTCTCATTGAGAAGGATCGTGGATGTGCACAGATGATC
TGCCGATCGTGCAGTCATGTGTTTTGTTGGAATTGTTTAAAATTACTTGATAATGACTTT
ATGCTGCATCATTACGATAAAGGTCCCTGTAAAAACTTCCTTGGTCACTCGAGGGCACAA
GTTATGCGACATCGACTTGGGGTTATTGGTCTTTTCTCAGCATTCACTCTTCTTTTAATC
GTAGCTTCACCGGTGCTAATATTAGCAGCACCGATTTTGCTCTGCTGTAAATGCAAGGAT
TGCTGCAGGAAGATATGGCGACGAGACGATGCGAGTGTTATTGATGTTCCCATAACAACC
AACAATATTAACCAATCAACGCAGACGTACCATAAAGTATCGAAAACTTCCAATCAAATA
AACGTACCTGCCGATATTTCTATGGAAGAAGGATCTGTGACATCACAATCATCAACTGCG
GAACTTAATAAATGACAAGTGTCGAAAAGTTCAATCAACACAAGATACTTGTTTATCTGT
TTATGTGTACATTTATTACTTTTCTTGCACATGATTCTTCCTGTATTTGCACTTTTTACT
CGATAGTTCATTGAAAATGTACTAGTTGCTTTTGGATTCTAAAGGTAGTAGTATTAAATT
ATTATCTGTAATTAATAATGGTTGCTTAGTGCATTGCTTTCCGGAGCAAAAATTTTCAAA
ATAACTGAATTAATTCAACAGTTGAAAATCATATTTGCGCTTCTTTGCTTTTTCATCTTT
GAAGCTGCTCTTGTATTGAATGGTTCAATGAAACATCTCTTTATTGTTCTTTACCTGAAT
GTTTAT

InterProScan

SMART	IBR_dom (IPR002867) - T[16-90] 0.68 - T[102-170] 0.016
Pfam	IBR_dom (IPR002867) - T[20-86] 1.5E-5 - T[114-155] 2.9E-9
PANTHER	E3_UB_ligase_RBR (IPR031127) - T[23-218] 9.4E-60 - T[252-301] 9.4E-60
ProSitePatterns	Znf_RING_CS (IPR017907) - T[144-153] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
R144A_HUMAN	47.872 %	178	5.36E-55
R144B_HUMAN	43.564 %	162	7.02E-49