Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'KH2012:KH.C12.652.v1...' > 
  2. Transcript 'KH2012:KH.C2.424.v1....' > 
  3. Region 'REG00001228' > 
  4. Region 'REG00000031' > 
  5. Transcript 'Mooccu.CG.ELv1_2.S37...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S374731.g16675.03.t

Possible name(s)

ACTA2; ACTB; ACTG1

Gene model

Mooccu.CG.ELv1_2.S374731.g16675

Location

S374731 [4,112 / 4,503]

Sequences

Amino acid sequence

Length: 112

>Mooccu.CG.ELv1_2.S374731.g16675.03.p
EEDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNP

Nucleotide sequence

Length: 336

>Mooccu.CG.ELv1_2.S374731.g16675.03.t
GAAGAAGATGATGTTGCTGCATTAGTTGTTGATAATGGATCCGGTATGTGCAAAGCCGGT
TTTGCTGGAGATGATGCTCCAAGAGCCGTCTTCCCTTCAATCGTAGGACGACCAAGACAT
CAGGGTGTCATGGTTGGAATGGGCCAAAAAGATTCATACGTCGGAGATGAAGCCCAAAGC
AAGAgaggtatccttacacttaaatacccaatcgagcacggaatcgtcacaaactgggac
gatatggagaagatctggCATCACACTTTCTACAATGAACTCCGTGTTGCACCAGAAGAA
CATCCCGTCCTCCTTACCGAAGCCCCACTTAACCCA

InterProScan

PANTHER
Actin (IPR004000) - T[2-112] 2.5E-76
Pfam
Actin (IPR004000) - T[3-112] 4.1E-39
PRINTS
Actin (IPR004000) - T[26-35] 3.6E-24 - T[49-60] 3.6E-24 - T[61-83] 3.6E-24
ProSitePatterns
Actin_CS (IPR004001) - T[53-63] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
ACTG_HUMAN 96.396 % 234 1.92E-78
ACTB_HUMAN 98.198 % 237 2.93E-79
ACTA_HUMAN 92.857 % 229 3.21E-76