Aniseed - Transcript Card

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S354009.g15390.01.t

Possible name(s)

PKD1L2; PKD1L3; PKDREJ

Gene model

Mooccu.CG.ELv1_2.S354009.g15390

Location

S354009 [7,294 / 8,448]

Sequences

Amino acid sequence

Length: 138

>Mooccu.CG.ELv1_2.S354009.g15390.01.p
MSTVISLYIFFLLLMVWARKRDKEDFAKLPYYEVEDNKPADRYRYLVVMYTGSRHKAGTT
ATVVITLIGSDDQSSAHLLQTKETRLLTRGSAVTFLITTPHCLGDIQAIRLWHNNTGSSP
EWYDMFQGATIHYNHFS*

Nucleotide sequence

Length: 1,029

>Mooccu.CG.ELv1_2.S354009.g15390.01.t
GAGTGGTGGCAAATCTGACTGGACATACTGCAGTTGTGACGCTTCAGCAGTTTCAAGGTC
ATTACTTGGTTCAGGGGCTTCGATTTTTGCGACACAATTGATAATCTATCCCAATAAAAT
AGACTTCGACAAGGTACCGGTACAGTTGCGGTGTGGATTTAAAACAATCTTTGAAGTGTA
TTTTTAAAGGTTTCATGGAATATTCCTGCGGAATTTTCGGAAAATCCGATCGTTATGTCA
ACTGTGATTTCGCTTTAtatcttctttttactgttgatggtttgggcacgtaagcgggat
aaggaggattttgccaaaCTTCCATATTACGAAGTGGAAGACAACAAACCTGCCGATCGT
TACCGCTACCTTGTGGTCATGtacacaggttcacgacacaaggcaggtACCACTGCCACT
GTGGTGATTACATTAATTGGTAGCGATGACCAAAGCTCAGCACATTTATTGCAAACCAAA
GAAACACGTTTACTTACAAGAGGCAGCGCAGTAACATTCTTGATCACAACTCCACATTGT
CTTGGCGATATACAAGCGATTCGATTGTGGCATAACAATACTGGATCAAGTCCTGAATGG
TACGACATGTTTCAAGGCGCCACAATACATTACAATCACTTTTCGTAGGTATCTTGAGCG
ATTTATGGTTTGGGACGTGGAAAAGGACACTTGTTGGTTTGTAgtcgccaaacgatggtt
ggccgacgattcacaaatcgatgttttacttcatgtgtccactgcaagggaacttcacac
atttcagagtttgtatgcgatcaagacggacgcatatcttcgtgatatcgacttatggTA
CTCATTGATCGGCATGAGGGCGTGGTCATGTTACGAGATGACCAGGATGCAACGAGTGGG
ATGCTGTGCTCTCATCCTCTCCTTGATAATGCTCACTTCACTCATGTTTTATGGCGTGGA
AGAACGTGCTGGAGGTCCGGAGTTGTTTGACTTGGGTTATTATTCGTTCAAGTGGAGTAA
CGTCGGTGT

InterProScan

SMART	PLAT/LH2_dom (IPR001024) - T[121-234] 8.6E-4
ProSiteProfiles	PLAT/LH2_dom (IPR001024) - T[121-252] 17.352
SUPERFAMILY	PLAT/LH2_dom_sf (IPR036392) - T[122-201] 8.8E-18
Pfam	PLAT/LH2_dom (IPR001024) - T[123-201] 6.9E-12

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PK1L2_HUMAN	41.667 %	101	4.94E-26
PK1L3_HUMAN	43.089 %	111	1.78E-29
PKDRE_HUMAN	43.443 %	92	1.24E-22