- Transcript 'Mooccu.CG.ELv1_2.S33...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S339894.g14533.01.t
Possible name(s)
HOXA4; HOXB4; HOXC4
Gene model
Location
S339894 [5,304 / 9,110]
Amino acid sequence
Length: 268
>Mooccu.CG.ELv1_2.S339894.g14533.01.p
QETLKKLKLMIKMSSAKVNPMDNQPSLYDVSMLPQFQISPPGPMPYSSDANGIHGTQDHV
SYDRRDDGVLNGGGFYGDKIKGDSDGKFKVSPSDENSAEPKVYPWMKRMHMNQQPNNVVA
EQGEPGKRPRTAYTRHQVLELEKEFHYNRYLTRRRRIEIAHSLCLTERQVKIWFQNRRMK
WKKDHKLPNTKSSHQNKKNRQRPATIHHEPAEDFFSSIPGSSSFQPIPDIHISGYHHTLP
QFSIEEPVEQRGVSFDHGESLQYSANPA
Nucleotide sequence
Length: 804
>Mooccu.CG.ELv1_2.S339894.g14533.01.t
CAAGAGACATTAAAGAAATTGAAATTAATGATTAAGATGTCCAGTGCAAAGGTCAATCCA
ATGGACAATCAACCAAGTTTATATGACGTATCAATGCTGCCTCAATTTCAAATCAGCCCT
CCAGGACCCATGCCATATTCTTCCGATGCCAATGGTATCCATGGTACCCAAGATCACGTG
TCGTATGATCGACGGGATGACGGAGTGTTGAACGGCGGTGGTTTCTATGGCGATAAGATT
AAAGGTGATAGCGACGGAAAGTTCAAAGTGTCACCTTCCGACGAGAATTCCGCCGAACCC
AAAGTATATCCGTGGATGAAGAGAATGCACATGAACCAACAACCAAATAATGTGGTAGCG
GAACAAGGCGAACCTGGGAAGCGTCCAAGGACAGCTTACACGCGACACCAAGTGTTGGAA
TTGGAGAAAGAGTTTCATTACAATCGATATCTGACAAGAAGACGACGGATTGAAATAGCA
CATTCGTTATGCTTGACTGAACGCCAGGTAAAAATTTGGTTTCAAAATCGACGAATGAAA
TGGAAAAAAGACCACAAACTTCCAAACACGAAATCAAGTCACCAGAACAAGAAAAACCGC
CAAAGACCCGCCACAATCCACCATGAACCTGCAGAAGATTTTTTCAGCAGCATTCCTGGA
TCAAGTTCGTTTCAACCAATCCCAGACATTCATATTTCTGGCTACCATCACACTTTGCCA
CAGTTTTCTATCGAAGAACCTGTGGAGCAACGAGGAGTGTCATTCGATCATGGAGAATCG
TTGCAGTATTCAGCAAACCCAGCT
| PRINTS |
Homeobox_antennapedia (IPR017995) - T[101-108] 1.1E-5 - T[127-142] 1.1E-5 |
| ProSitePatterns |
Homeobox_Antennapedia_CS (IPR001827) - T[102-107] . |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[106-184] 1.37E-26 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[124-184] 21.929 |
| SMART |
Homeobox_dom (IPR001356) - T[126-188] 8.5E-28 |
| CDD |
Homeobox_dom (IPR001356) - T[127-185] 7.52279E-26 |
| Pfam |
Homeobox_dom (IPR001356) - T[127-183] 4.3E-23 |
| PRINTS |
Homeobox_metazoa (IPR020479) - T[148-159] 3.8E-9 - T[163-173] 3.8E-9 - T[173-182] 3.8E-9 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[159-182] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HXA4_HUMAN | 74.257 % | 154 | 4.91E-45 |
| HXC4_HUMAN | 75 % | 154 | 5.67E-46 |
| HXB4_HUMAN | 73.267 % | 155 | 2.4E-46 |