- Transcript 'Mooccu.CG.ELv1_2.S27...'
Transcript Model
Transcript Id
Mooccu.CG.ELv1_2.S277095.g10802.01.t
Possible name(s)
CHADL; LRRC15; TRIL
Gene model
Location
S277095 [4,382 / 10,764]
Amino acid sequence
Length: 421
>Mooccu.CG.ELv1_2.S277095.g10802.01.p
FSFKVNSILKSLDLSDNFIKDVRKHSFQNMGMLSELKLDDNVISRLHGYTFTYNNNLRYL
SLTGNKIQSVDQSAFYNLNGLEVLRLDGNQITKLESGTFSWLPHLKELSISYNKLTVVPS
TISANLPNIQMLNLANNSLAQLLPNDLQNMSHLVSLSLQNNSLSQIESGVFETNLNLSYI
NLERNELEWISDDAFLPPCNLVYLMLNHNRLTTPNPSWFHHVINNSNGQNFPGHGDGNPW
RCDCAIVPFYDYYAGKSRLTTVWMEKLQIECQDKRFRNEKLDYALVHNIKQIFRCKVAAE
RQHSSTNKRRKPEPKQHQKQESTTTTPTPTAYSTPKCTTNLNTDGNIYFVNNKPYVPREH
VRQPNYQMMKYDHASTTHYDKIVLTIVGALCSVTVLLSFLLIMYCVCGRPNRFRRREVYL
*
Nucleotide sequence
Length: 2,385
>Mooccu.CG.ELv1_2.S277095.g10802.01.t
TTTTCATTTAAAGTAAATTCCATATTGAAAAGTTTGGATCTGAGCGATAACTTCATAAAA
GACGTCAGAAAACATTCATTTCAAAATATGGGAATGTTATCGGAACTAAAACTCGATGAT
AATGTAATTTCGCGTCTACACGGATACACTTTCACTTATAACAACAACCTGCGATACCTG
AGCTTAACAGGAAACAAAATTCAAAGTGTCGACCAATCAGCGTTTTACAATCTCAATGGA
TTGGAAGTTTTGAGATTGGATGGAAATCAAATTACTAAACTGGAATCCGGAACATTTTCT
TGGTTGCCACATTTGAAAGAACTCTCAATTTCTTACAACAAACTAACTGTCGTACCTTCG
ACCATTTCGGCAAATCTACCAAATATACAGATGCTAAATTTAGCCAACAATTCATTGGCA
CAACTTTTACCGAATGATCTTCAAAACATGTCACATTTAGTTTCTTTGTCCTTGCAAAAC
AACTCTTTGTCGCAAATAGAAAGTGGCGTGTTTGAAACAAATTTGAATCTCAGTTACATT
AACTTGGAAAGAAACGAACTGGAATGGATATCTGACGACGCTTTCCTTCCGCCGTGCAAT
CTTGTGTACCTGATGTTAAATCACAACAGATTAACAACGCCAAACCCATCATGGTTCCAT
CACGTCATTAACAACTCGAATGGGCAAAATTTCCCCGGTCATGGAGATGGAAATCCATGG
AGATGTGATTGTGCTATTGTCCCGTTTTATGATTATTATGCTGGAAAGTCTAGACTAACA
ACTGTTTGGATGGAAAAATTACAAATTGAGTGCCAGGACAAAAGATTTAGAAATGAAAAA
TTAGACTATGCTTTGGTGCACAATATCAAGCAAATATTTCGCTGCAAGGTGGCAGCCGAG
AGACAACATTCATCAACAAATAAACGACGGAAACCAGAACCAAAACAGCATCAAAAACAG
GAGAGTACGACTACCACACCCACACCCACGGCCTACTCCACACCTAAATGCACAACAAAT
CTAAATACCGATGGCAATATTTACTTTGTTAATAATAAACCTTATGTGCCAAGAGAGCAT
GTACGGCAACCAAATTATCAAATGATGAAATACGACCATGCCAGCACAACCCACTATGAC
AAGATCGTACTTACGATCGTGGGAGCTTTATGTTCCGTTACAGTTCTGCTTTCATTCCTA
CTAATAATGTACTGTGTATGTGGAAGACCGAACAGGTTTAGAAGAAGGGAGGTTTATCTG
TAGGGCACTCATCTAAGGATGCATTCCTCCATTGGTGCTATTGAACTTACGTTTTCTGAC
TATGTGTTGCTGCACTTTTGCTGTTACCTGCTTTTTATGTTTCTTGTTTTATGAATATGT
TGTTACATCACATGACAATACTCGTTATCTATTGATTATATTATATTTATTTTCGATGTT
TTGTTTTGAGAATTTCTTTTTGAAGTACCTGTAAATTTATTCGCGAAAATATATTCCACC
AATACAATGAATTCAAGCTCTACAACAGTTCAGTTTCATTTTAAATATACATTCGTTTAA
AATAAATAATAATGATAAACTACAAGCTTCAATATTAAACAAATTTATTGTCTGAATAGC
AGGCACCTCATAATTACATTATCTACTGCACAAAATAATAAGTCAATTTAAATATCTGTC
ATTGTGTTCCTTAAAAGCATAGTAGAAATAAGTGACAATTTTCCTATCATCACCAAAACG
TCATACGACGGATGCTTTCTTCAGACAACTCTTCTCACTTCGAAAAATCGCTTCAAATAG
TAAATTTGTCCGAGTGTCATGGCAACGAGAACTAACGATTCGAAGAAAGCCCACAAAACC
ACACGCGAATTCGTGTTGTCATTTATTGCTCTGTGTATTCTCTCTCGAACTTCCATGTAT
TCTTGTTCGTGTTTAACCCCGGTCATCGCCACGGACAACTCGTTGATCATCTGTTCAAGT
TTGTTTTGATGTTCATCGTCACTTTCTTGTGGTGTGTCTTTTGGTGCTTCACCAACGTCA
AGTGAAAACATAACAATTTTTGGTGTGACGGAAGACATTTTATTACTGAAGCATATTTTA
TATGTTCCATCCATATGAGCTGCAAATGCGTATTTGCCATTTGATTCCTTAGCTCCGGTG
TAGATGGGTTTATTGTCAGGACCAGAAAGCTCAACATCAATGTCCAAAAAACCTCCTTCA
GCTACTTCAAAAGTGAGTCCAATTTTCGTTCCAGATTCAACTTTTTCGTAAAAACATTCT
TCAGCATGAGCATCTACTGTGACGAAGTAGGCATCATTGGACTTCAAAAACAACATGCAT
AGAAGCAGTGTAATGGCTAATAACTTCATTTTGCTGGCAATACTG
| Gene3D |
LRR_dom_sf (IPR032675) - T[2-99] 7.9E-21 - T[100-300] 5.1E-34 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[8-29] 7.088 - T[32-53] 5.841 - T[56-77] 7.72 - T[80-101] 7.134 - T[104-125] 6.426 - T[128-149] 5.833 - T[152-173] 6.98 - T[176-197] 6.888 - T[200-221] 5.871 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[9-30] 1.1 - T[56-115] 1.4E-15 - T[128-150] 0.49 - T[151-211] 1.1E-9 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[9-29] 93.0 - T[30-53] 16.0 - T[56-77] 26.0 - T[78-101] 0.023 - T[102-125] 0.046 - T[126-149] 13.0 - T[150-173] 0.061 - T[176-197] 110.0 - T[199-221] 230.0 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRC15_HUMAN | 30.738 % | 105 | 2.15E-24 |
| TRIL_HUMAN | 25.62 % | 94.4 | 1.22E-20 |
| CHADL_HUMAN | 26.351 % | 96.7 | 1.9E-21 |
