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  1. Transcript 'Mooccu.CG.ELv1_2.S14...'

Transcript Model

Transcript Id

Mooccu.CG.ELv1_2.S146967.g04681.01.t

Possible name(s)

LIN54; TESMIN

Location

S146967 [34,551 / 43,583]

Sequences

Amino acid sequence

Length: 619

>Mooccu.CG.ELv1_2.S146967.g04681.01.p
MGRLPTITAKMTSTATVIKPEPTITKTIVTRSIPSTLAGKMIAVTTSNRQPLQIIKKAGG
GGPIVTKYILKPATNASGLAASKSGQKVMVATTLKNTLKPVVKSPIKKLTQSGSNIVLSP
IKGGFKIPISPMKSPIKVSVLGNASTKLQNIINAVPSTEVGRVHQYKVTPQGNISVQMQA
PNANNGMITKTFSMQQPIFLQQKPTQTVVGQNKTNQNNGVLQQVIPTNQAIRVDTSGMKY
QYVQIVNPSQSASKSQVHPISVSGNNIPINNPLTVIQQAPGFQKIHQNRVKSVPQTLKVS
VANPSAGQQQQAKQRLIMPATSMPPLRPNLTNVQSNSIITGADNVRYAMVPAKYVEQLNK
INSQQQFNQDNTNQHSPTTIIRQQPPTQLKTSAGKLKKPCNCTKSQCLKLYCECFANGHF
CDGCNCNNCFNNLEHEHERSKAIKLCLERNQNAFKPKIGRGKDDHRTHQKGCNCKRSGCL
KNYCECYEARIPCTSKCKCIGCKNYEETGDRRSLMSLADAAEVRERQQMAAKSKLSSQIG
DLRVMSKPITPSGERLPYTFFTQEVIEATCTCLLAQAEEAEKTNRSMSVAETMILEEFGR
CLMQIIQSAGKAKVTNLT*

Nucleotide sequence

Length: 2,664

>Mooccu.CG.ELv1_2.S146967.g04681.01.t
CAGGCTTTTGTCTTTGTTTTACTAAAATACTTCCTTCTACTTACTAGTAATTTTCTAGGC
TATTCAATGGTATTTCGTGTTAACAAAGTTAAATGTAAATTTCTATTTTACCCTGTAATC
CGTGGCAATATCACTTTTCATAATGTCTCTTAATATGGATCTGAACAAAACTCCGGATTT
GCAAGACTTCCTAACAATGGAACCAGATTTGGATGCTATAAAGCGCAGCACATCTCCTGT
AACTGTTGGAATACCAATATCGCAAAATTCATCTCAGATAATGACCCCAGCGAAACTTCA
TATGCATGGTGAGCCACTCCAGAAAGGACATTCAAATGAAAACGACAGTGACGGAAATGC
AACGGATACAACCGTAAGCGCTGGTTCCATAGATGATATGTTGGATGGTATTAAATCACC
TTCGCCAGCGACTGCAGCTGCTATGGAAAACTTGCTTGAAGATGACGAGTTAACTTGTAA
GCTAAAACATTGTTTAGTTAATTTTACTACTTATTGAAATTAGCTTCCATTCCAGGTAGT
AGCCCTATGGGACGGCTGCCGACTATAACTGCAAAAATGACGTCAACAGCTACAGTAATC
AAACCCGAGCCAACGATCACTAAAACTATTGTAACTCGCTCGATTCCATCAACACTTGCA
GGGAAAATGATTGCCGTAACCACAAGCAATCGTCAGCCCTTACAGATTATCAAGAAAGCT
GGAGGAGGCGGTCCCATTGTTACAAAGTATATTCTCAAGCCAGCCACAAATGCTAGTGGA
TTGGCTGCTTCAAAATCTGGACAAAAGGTTATGGTAGCGACAACTCTAAAAAATACTCTA
AAACCCGTTGTCAAATCTCCCATCAAGAAGCTTACTCAATCAGGAAGCAATATTGTTCTG
TCGCCCATCAAAGGGGGGTTTAAGATACCAATATCACCCATGAAGAGTCCAATTAAGGTT
TCAGTTCTTGGAAATGCTTCCACAAAGTTGCAAAATATTATAAATGCTGTGCCTTCTACC
GAAGTGGGAAGAGTCCATCAATACAAAGTCACGCCACAAGGAAATATTTCTGTACAAATG
CAGGCTCCAAATGCTAATAATGGAATGATTACAAAGACATTTTCCATGCAGCAACCAATT
TTCCTGCAACAAAAACCAACACAAACAGTTGTTGGGCAAAATAAAACAAACCAAAACAAT
GGCGTTCTACAACAAGTTATCCCAACAAATCAAGCAATACGAGTTGATACCTCAGGTATG
AAGTATCAATATGTTCAAATTGTTAACCCATCACAATCTGCTTCAAAGTCGCAAGTGCAC
CCGATTTCTGTAAGTGGTAATAACATACCGATAAATAATCCCTTGACGGTTATACAACAA
GCACCTGGTTTTCAAAAAATTCATCAAAATCGTGTTAAATCTGTTCCTCAAACTCTCAAG
GTGTCCGTTGCCAATCCATCTGCTGGACAACAACAGCAGGCAAAACAACGGCTGATTATG
CCTGCAACGTCGATGCCACCTCTTCGTCCAAACTTAACAAATGTGCAGTCAAATTCAATC
ATAACTGGTGCAGACAATGTTAGATACGCGATGGTTCCTGCAAAATACGTCGAGCAATTA
AATAAAATCAATTCTCAGCAACAGTTTAATCAAGATAATACCAATCAGCATTCACCAACT
ACGATAATTCGGCAGCAGCCTCCAACGCAATTGAAAACATCCGCCGGGAAACTAAAGAAA
CCTTGTAATTGTACCAAATCCCAGTGCCTTAAGTTATACTGTGAATGTTTTGCAAACGGA
CATTTTTGTGACGGATGCAATTGTAATAATTGTTTTAACAATCTTGAGCACGAACACGAA
CGATCAAAAGCAATAAAACTTTGTTTGGAGCGAAACCAAAACGCTTTTAAGCCAAAAATT
GGTAGAGGAAAAGATGATCATAGAACACACCAAAAAGGGTGTAATTGTAAGCGATCTGGT
TGCCTTAAAAATTACTGTGAATGTTATGAGGCACGGATTCCATGTACTTCAAAGTGCAAG
TGCATCGGATGTAAGAACTACGAAGAAACTGGCGATCGACGCTCGTTAATGTCACTTGCT
GATGCTGCGGAGGTCAGAGAACGACAACAGATGGCAGCAAAGAGCAAACTTTCAAGTCAA
ATTGGAGATCTTCGTGTTATGTCCAAACCTATTACACCTTCTGGGGAAAGACTGCCTTAT
ACCTTTTTCACCCAAGAAGTTATAGAAGCAACTTGTACCTGTTTATTAGCTCAGGCGGAA
GAAGCTGAGAAAACTAATCGTTCCATGTCAGTTGCGGAAACAATGATATTGGAAGAGTTT
GGGCGCTGCTTAATGCAAATTATTCAATCTGCCGGAAAAGCTAAAGTTACCAACTTGACG
TGATGCACCAGTATTCAGTCAACTCAAAATTGCTTCAAAGGTCGTGCTTCGAAAAATTTG
TGCCAAAGTCACGTTTATGTTAAAGAAAAGCCTTACGGATCGAACGTCTGCACTTATATG
ATTTGTTAACTTCAAATGGTTACACTATTGACATTTAGTGTGTAATCCCCATACCTCAAC
AAAATGTATCTTTAAAAATATGCCTTTTTTGGTGATGTTGATAAATTTAATGAAATTTGG
ATGTTTTAGATAATTTCTCGTTTT

InterProScan

PANTHER
Lin-54_fam (IPR028307) - T[227-796] 2.1E-119
SMART
Tesmin/TSO1-like_CXC (IPR033467) - T[577-617] 6.7E-18 - T[649-690] 6.7E-19
ProSiteProfiles
CRC (IPR005172) - T[578-689] 33.465
Pfam
CRC (IPR005172) - T[579-614] 5.2E-11 - T[651-687] 4.7E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LIN54_HUMAN 50.245 % 358 2.24E-114
MTL5_HUMAN 54.762 % 194 7.68E-55