- Transcript 'Boleac.CG.SB_v3.S135...' >
- Transcript 'Moocci.CG.ELv1_2.S19...' >
- Transcript 'Harore.CG.MTP2014.S7...' >
- Transcript 'KH2012:KH.L149.18.v2...' >
- Transcript 'Phfumi.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S9.g00199.01.t
Possible name(s)
CR1; SELE; SELP
Gene model
Location
S9 [15,502 / 22,679]
Amino acid sequence
Length: 330
>Phfumi.CG.MTP2014.S9.g00199.01.p
MKLIIVFCLFGISAVTALHCWQCENAWGNEDCLAKGHLQKCQVNEQSCQTEIRHGNWNSR
VLIKKGCKQPHACINNYVQNPRGAWVPSQCNEKDPSSVCRCCCDTDSCNMDLTSCTDKSP
RCQPPHVAPVNGGVQCSKGNAIGSECSFECDAGYDLVGEVFSVCQIFCLPALQSPANGAF
VCTDDVRVGSICSFECDEGYALEGNRRSTCNDEGGVGVWSNPAPVCKVITCLPIHVAPAN
GGVVCTNSNFLASVCEFTCDPEYFMVGNKISVCGRAPSGGIFGTWSQGAPVCQRKSCPPL
PGSPLNGRTICSDGSFIGSVCEFICDDYHR
Nucleotide sequence
Length: 1,905
>Phfumi.CG.MTP2014.S9.g00199.01.t
ATGAAGTTGATTATAGTATTCTGCTTGTTCGGGATTTCGGCTGTAACTGCGCTTCATTGC
TGGCAGTGCGAGAATGCTTGGGGGAATGAAGATTGTTTGGCAAAAGGACATTTACAAAAA
TGTCAAGTAAACGAGCAATCTTGTCAAACCGAGATTCGCCATGGAAACTGGAACAGTCGA
GTTCTGATAAAGAAGGGTTGCAAACAACCTCATGCGTGCATAAACAACTATGTGCAGAAC
CCTCGTGGTGCTTGGGTTCCATCCCAGTGTAATGAGAAAGACCCTTCCTCGGTTTGCAGA
TGTTGTTGTGACACCGATTCGTGTAATATGGATCTCACATCATGCACCGATAAATCACCC
CGTTGTCAACCCCCACATGTTGCTCCAGTCAACGGAGGTGTGCAATGTTCCAAAGGAAAC
GCGATCGGTAGCGAATGCTCATTTGAGTGTGACGCCGGATACGACTTGGTTGGAGAAGTC
TTCTCCGTTTGCCAAATCTTTTGCCTTCCTGCACTTCAATCGCCCGCTAATGGCGCGTTT
GTGTGCACCGATGACGTCAGAGTGGGAAGCATTTGCTCGTTCGAATGTGATGAGGGTTAC
GCACTAGAAGGAAACAGACGAAGCACTTGTAATGACGAAGGGGGTGTTGGGGTTTGGTCA
AACCCAGCTCCTGTTTGTAAAGTTATAACTTGCTTGCCAATCCACGTAGCACCAGCCAAT
GGCGGAGTCGTTTGCACAAATTCAAATTTTTTGGCAAGTGTCTGTGAATTCACCTGCGAC
CCAGAATATTTTATGGTTGGGAATAAGATTTCTGTGTGCGGGAGAGCACCGAGTGGGGGC
ATTTTCGGAACTTGGAGTCAGGGAGCGCCTGTTTGTCAACGTAAATCATGCCCACCCCTT
CCTGGTTCCCCATTGAATGGACGAACCATTTGTTCTGATGGGAGTTTTATTGGGTCAGTG
TGTGAATTTATCTGTGATGACTACCACCGATAGGAAGGTGACTTCACTTCACAGTGCATA
GAGTTTGCTGATGGATCAATAAACTGGGATAAACCAGTTCCAACCTGCCAGCCAAACTTG
TGCAACCACCAGGAGGCGCTAGCACATGGAGTGATTGATTGTACAAAGGATAACTTCGCC
ACATCTCAGTGCAACTTCCGCTGTACTACACCCACATACAGCTTGTACCCACCAGAAAGT
ACTTCTAATGTTTGCCAGAACAACACCCAATGGAATATCCCAATGCCTTGTTGTGCAAGG
TCATGCCCTCCTTATGCTGTAATGGACTTCATTGTTATTCTTGATTCTTCTTCCTCGGTC
GGGAGCGACAATTGGTCCAAGATGAAAAATTTTGTTAGAAATTTTCTTGATGACTTCTCA
GTTTCACCTGATGCAAGTCATTATGGGATCTTCAGATACAATAAGGTTGTTGATACAGAT
ACTCAAATCCTGCTCAATGACTACCCTAATGACATCGAAGCTTTGCTAAATGCTTTCGAT
GAAATCCCATATGATGGATCTGGCACCAGAACAGGAAATGCCATCAGCCACGCAGTGGAC
GTCATGTTGAAAGATGGAAATGGAAACAGACCAGGAGCGCGAGATGTTGTGTTGATTATA
ACTGATGGAAAATCGCAAGATCCGGTTGCGCTGCCATCGCAAAGACTCCGAGATACAGGG
GCTATTGTGTTCGTCCTTCCTATTAAGCCTCCACAACGGAACCCGAACAAAGTTATTACC
TTTGATATGGACGAAATCATTTCAATGTCCGGAAGTGAAGAACGTGTGATAACAGCTGCT
CTTGAGGGAGGATTTGATGCCCTCACCGATGAATTCTCAGTTGAAGTCAGCGACATGATC
TGTGGAAACCCCTGCGATCACGTGCTTCATACCCACCAAGGTTAA
| SUPERFAMILY |
Sushi/SCR/CCP_sf (IPR035976) - T[121-166] 2.15E-6 - T[171-235] 6.25E-15 - T[235-301] 1.81E-10 |
| CDD |
Sushi_SCR_CCP_dom (IPR000436) - T[122-165] 4.99171E-5 - T[170-227] 2.72052E-9 - T[233-293] 3.20591E-5 |
| SMART |
Sushi_SCR_CCP_dom (IPR000436) - T[122-168] 0.075 - T[169-226] 5.8E-12 - T[231-292] 9.4E-5 |
| Pfam |
Sushi_SCR_CCP_dom (IPR000436) - T[122-165] 0.0059 - T[172-226] 1.4E-9 - T[238-292] 1.5E-5 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[166-228] 9.432 - T[229-294] 7.588 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LYAM3_HUMAN | 31.78 % | 87 | 1.0E-18 |
| LYAM2_HUMAN | 29.839 % | 86.3 | 1.56E-18 |
| COCA1_HUMAN | 37.333 % | 96.7 | 5.25E-23 |
| COKA1_HUMAN | 29.897 % | 84.7 | 5.19E-19 |
| VWA2_HUMAN | 33.103 % | 87 | 7.69E-20 |