- Transcript 'Boleac.CG.SB_v3.S246...' >
- Transcript 'Cisavi.CG.ENS81.R9.3...' >
- Transcript 'KH2012:KH.C9.344.v1....' >
- Molecular Tool 'Hox12-MO (Ikuta 2010)' >
- Transcript 'Phfumi.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S968.g03056.01.t
Possible name(s)
NECTIN3; NECTIN4; PVR
Gene model
Location
S968 [12,984 / 19,126]
Amino acid sequence
Length: 560
>Phfumi.CG.MTP2014.S968.g03056.01.p
MGRQTSMPCYDPATANGFESLFVKVDFTSPDGKTSFSVCHYQPGNQDLQNIDSKYQGRIG
FTSVGAMTINSVSLTDEGVYTCTSNAFGVTIPPVKTNLSVYVAPIVEVRKIEDPLLSGSD
ELQAAACTASNGKPPASVEWMTDRNLLFNESTSNVATNEQLQGVQTVEKILHIRPTKFYN
GKSFFCVVKHPGFEEDVNKVVVLNVTYPPEKAVVIVNNDREGLTCESEGNPPPTITWLMP
PIAPAPTFRGKTVMLISPQDPARSNDSYTCVASNGISPDQRTTVTTAFAVTYVEITQQAN
VGAIVGGVIGGLALLAIIVLLVYVFVLKPSREKDTGPYQYSGTTMLYKENSGGSRPTIEH
ANESLNRNRPPSPTGPPPEDKMDRSDTSSESGSDEGNHDVDVEVNPATNLVDPDRQDNAE
IGGITSRASARRKRPSTSPAHRQSRSENHMPRKEESPVPNPRQNVRYDTPPGNDYDDDDE
LIQDERYQGYPSEEYDDRYQPQYVGYPAGRQPPRRMDSLPQHEPKYTEIDHTGYQGGHRR
PQFEEPVEYAQIRHGYSHVV
Nucleotide sequence
Length: 1,683
>Phfumi.CG.MTP2014.S968.g03056.01.t
ATGGGAAGGCAAACTTCCATGCCATGTTATGATCCAGCTACTGCAAATGGATTTGAAAGC
CTTTTTGTAAAAGTTGATTTTACTTCCCCCGATGGCAAAACCAGTTTTAGTGTTTGTCAC
TATCAGCCAGGAAATCAGGATTTACAAAACATTGACTCGAAGTATCAAGGAAGAATTGGA
TTCACTTCAGTAGGTGCTATGACCATAAATAGTGTAAGTTTAACAGACGAAGGTGTCTAT
ACTTGCACGTCCAATGCATTTGGTGTAACGATACCTCCTGTTAAAACAAACCTTAGTGTT
TATGTTGCACCAATTGTGGAAGTGCGAAAAATAGAGGATCCTCTTTTATCTGGGTCTGAT
GAACTTCAAGCGGCAGCCTGTACAGCCTCGAATGGTAAACCTCCTGCTAGTGTTGAGTGG
ATGACAGACAGAAACTTACTGTTTAACGAATCAACATCAAATGTTGCTACAAATGAACAA
CTGCAGGGAGTACAGACTGTTGAAAAAATCCTGCATATTCGCCCTACTAAGTTTTACAAT
GGAAAATCTTTTTTCTGTGTTGTCAAGCATCCTGGCTTTGAGGAAGATGTTAACAAAGTG
GTTGTTTTAAATGTAACATATCCACCAGAAAAGGCAGTGGTTATTGTAAACAATGACAGA
GAAGGCCTTACATGTGAGTCAGAAGGTAATCCACCACCAACCATAACATGGTTGATGCCC
CCAATTGCTCCTGCTCCGACGTTTCGTGGAAAAACAGTAATGTTGATTTCGCCGCAAGAT
CCTGCACGAAGCAATGACTCATACACATGTGTTGCCAGCAATGGAATCAGTCCTGATCAA
AGAACAACTGTCACAACTGCATTTGCTGTGACCTACGTTGAAATCACTCAACAAGCCAAC
GTTGGTGCTATTGTGGGAGGTGTCATTGGAGGTTTGGCACTCCTTGCTATAATTGTCCTC
CTTGTCTATGTATTTGTATTGAAACCTTCAAGAGAAAAAGACACAGGTCCTTACCAATAC
TCTGGTACCACAATGCTTTATAAGGAGAACAGTGGTGGTTCCCGTCCCACAATTGAACAC
GCCAACGAAAGCTTGAACAGAAACCGACCCCCAAGTCCAACAGGACCTCCACCAGAAGAT
AAAATGGATCGTAGTGATACATCCAGTGAGTCCGGGTCGGATGAAGGAAATCATGATGTT
GATGTGGAGGTAAACCCAGCAACAAACTTGGTAGACCCTGATAGACAGGACAATGCCGAA
ATTGGTGGCATCACTAGTCGTGCCTCAGCTCGCAGAAAACGCCCCAGCACATCTCCAGCC
CACCGTCAAAGCCGTAGTGAAAACCATATGCCAAGAAAAGAAGAATCACCTGTACCTAAC
CCACGGCAGAATGTGAGATACGACACTCCACCAGGAAACGATTACGATGACGATGACGAA
CTAATTCAGGATGAACGTTACCAGGGTTACCCCAGTGAGGAATATGACGATCGATACCAA
CCACAGTATGTTGGATATCCCGCAGGTCGTCAGCCACCGAGGCGTATGGATAGCCTTCCA
CAGCACGAGCCTAAGTACACAGAGATTGACCACACTGGTTACCAAGGAGGGCACAGGAGA
CCACAATTTGAAGAACCAGTGGAGTATGCACAAATTCGACACGGGTATTCCCATGTGGTG
TAA
| Gene3D |
Ig-like_fold (IPR013783) - T[1-94] 7.8E-8 - T[113-208] 7.6E-18 - T[209-287] 1.6E-7 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[38-105] 4.09E-7 - T[127-209] 3.21E-10 - T[201-283] 1.04E-7 |
| ProSiteProfiles |
Ig-like_dom (IPR007110) - T[104-198] 9.174 - T[208-285] 8.829 |
| Pfam |
CD80_C2-set (IPR013162) - T[114-195] 2.5E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| NECT3_HUMAN | 29.218 % | 106 | 2.67E-24 |