- Transcript 'Boleac.CG.SB_v3.S232...' >
- Transcript 'Phfumi.CG.MTP2014.S4...' >
- Transcript 'Phfumi.CG.MTP2014.S9...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S9040.g08247.01.t
Possible name(s)
TUBA1C; TUBA3C; TUBA3D
Gene model
Location
S9040 [2,139 / 5,176]
Amino acid sequence
Length: 456
>Phfumi.CG.MTP2014.S9040.g08247.01.p
LLLQRECISIHVGQAGVQIGNACWELYCLEHGIRPDGQMESARADGTGKGADDSFNTFFS
ETGAGKHVPRAVFVDLEPTVVDEIRSGTYRQLFHPEQMITGKEDAANNYARGHYTIGKEL
VDSVLDRIRKLSDQCSGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAVYPA
PQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQI
VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAFHEQLTVAEITNS
CFEPANQMVKCDPRRGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVG
INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME
EGEFSEAREDLAALEKDYEEVGVDSAEGDEEDVDDE
Nucleotide sequence
Length: 1,368
>Phfumi.CG.MTP2014.S9040.g08247.01.t
TTGCTTTTGCAGCGTGAATGTATCTCAATCCACGTCGGACAGGCCGGAGTGCAAATCGGT
AATGCTTGTTGGGAGTTATACTGCTTGGAACATGGGATCCGACCGGATGGGCAGATGGAA
TCTGCGAGGGCCGACGGAACTGGAAAAGGGGCCGACGATTCCTTCAACACTTTCTTCAGC
GAAACCGGTGCAGGCAAACACGTGCCTCGTGCAGTCTTCGTCGACCTGGAGCCAACTGTA
GTCGATGAGATTCGTAGTGGAACGTACCGGCAACTCTTCCATCCTGAGCAGATGATCACT
GGAAAGGAGGATGCTGCCAACAATTACGCAAGGGGACATTACACCATTGGAAAAGAGTTG
GTGGACTCTGTTCTCGATCGCATCCGGAAGTTATCGGATCAGTGCTCAGGTTTGCAAGGA
TTCCTCATCTTCCATTCGTTCGGAGGAGGAACAGGTTCCGGATTTGCATCACTGTTGATG
GAACGCTTGTCCGTCGATTACGGAAAGAAATCAAAATTGGAATTCGCTGTTTATCCTGCC
CCTCAGGTTTCCACAGCGGTTGTCGAGCCTTACAACTCGATTTTGACTACTCACACAACC
TTGGAGCACTCCGACTGTGCTTTTATGGTCGACAACGAGGCTATCTATGATATCTGTCGT
CGTAACTTAGACATCGAGCGTCCAAGTTACACCAACCTCAATCGGCTTATTGGCCAAATC
GTCTCTTCCATCACGGCTTCCTTGCGTTTCGATGGAGCTCTCAACGTCGATTTGACGGAG
TTCCAAACCAACCTGGTGCCATATCCACGTATCCACTTCCCATTGGTTACTTACGCTCCA
GTGATTTCGGCTGAGAAAGCTTTTCATGAGCAGCTTACTGTGGCTGAAATTACTAACTCT
TGCTTTGAGCCAGCTAACCAGATGGTAAAGTGTGACCCAAGAAGGGGAAAATACATGGCC
TGTTGCATGCTGTATCGCGGTGACGTGGTCCCAAAGGATGTGAACGCAGCCATCGCAACG
ATTAAGACCAAGCGTACAATTCAGTTCGTTGATTGGTGCCCAACTGGCTTCAAAGTTGGA
ATCAACTACCAACCCCCAACCGTTGTTCCCGGCGGCGACTTGGCCAAAGTACAGCGGGCT
GTTTGCATGTTGAGCAACACAACTGCTATAGCTGAGGCTTGGGCTCGTCTCGATCACAAG
TTTGACTTGATGTATGCCAAGCGTGCGTTTGTCCACTGGTACGTGGGGGAAGGAATGGAG
GAAGGCGAGTTCTCTGAGGCCAGGGAAGATCTTGCTGCGCTGGAGAAAGATTACGAGGAG
GTTGGTGTGGATTCAGCTGAAGGAGATGAGGAGGATGTTGACGATGAA
| Gene3D |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[4-274] 3.2E-128 |
| PANTHER |
Tubulin (IPR000217) - T[5-453] 0.0 |
| SUPERFAMILY |
Tubulin/FtsZ_GTPase_sf (IPR036525) - T[5-250] 7.46E-98 |
| Pfam |
Tubulin_FtsZ_GTPase (IPR003008) - T[6-219] 1.1E-67 |
| PRINTS |
Tubulin (IPR000217) - T[13-33] 8.4E-91 - T[59-78] 8.4E-91 - T[101-112] 8.4E-91 - T[114-138] 8.4E-91 - T[140-158] 8.4E-91 - T[159-180] 8.4E-91 - T[184-197] 8.4E-91 - T[198-218] 8.4E-91 - T[386-414] 8.4E-91 |
| PRINTS |
Alpha_tubulin (IPR002452) - T[21-36] 3.6E-118 - T[51-64] 3.6E-118 - T[94-107] 3.6E-118 - T[126-134] 3.6E-118 - T[154-166] 3.6E-118 - T[167-178] 3.6E-118 - T[220-232] 3.6E-118 - T[280-295] 3.6E-118 - T[327-348] 3.6E-118 - T[353-366] 3.6E-118 - T[366-385] 3.6E-118 - T[391-407] 3.6E-118 - T[428-444] 3.6E-118 |
| SMART |
Tubulin_FtsZ_GTPase (IPR003008) - T[55-252] 5.4E-83 |
| ProSitePatterns |
Tubulin_CS (IPR017975) - T[148-154] . |
| SUPERFAMILY |
Tub_FtsZ_C (IPR008280) - T[252-442] 2.11E-86 |
| SMART |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[254-399] 1.6E-58 |
| Pfam |
Tubulin/FtsZ_2-layer-sand-dom (IPR018316) - T[269-398] 5.6E-52 |
| Gene3D |
Tubulin/FtsZ_C_sf (IPR037103) - T[275-389] 1.1E-66 |
| Gene3D |
Tubulin_C (IPR023123) - T[390-456] 3.9E-34 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TBA3C_HUMAN | 94.558 % | 853 | 0 |
| TBA3D_HUMAN | 94.558 % | 853 | 0 |
| TBA1C_HUMAN | 92.17 % | 851 | 0 |