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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C12.604.v1...' > 
  2. Molecular Tool 'Dmbx>Twist' > 
  3. Transcript 'Phfumi.CG.MTP2014.S8...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S8786.g08190.04.t

Possible name(s)

SNW1

Gene model

Phfumi.CG.MTP2014.S8786.g08190

Location

S8786 [1,081 / 7,376]

Sequences

Amino acid sequence

Length: 511

>Phfumi.CG.MTP2014.S8786.g08190.04.p
DQLDPIQPTSKAVISMRYEPPPYGHRKGFIPRAERDFGDGGAFPEIPVVQFPLAMGKTKK
KKEALAVQLDSEGKIRYDAIARQGHSKDRVVHSKFQQLVPKEILDEDDPDLQRPDEDAIR
EQTESTRQALEKLTNEKITAAMPVKRAEQRAPAQYIRYTPSQQGVAFNSGAKQRVIRMVE
MQKDPMEPPKFKTNKKLPQGPPSPPAPVMHSPNRKLSVKEQQDWKVPPCISNWKNAKGHT
IPLDKRLAADGRGLQSVHINENFAKLAEALYIADRKAREAVEMRAQVERKVASKEKEAKE
RQLRQLAEEARNKRAGIKKDDRDDKEVKERDEIRHDRHRDRQRERNLARAAPEKRNRLRE
ERDISEKIALGLPNTRTAQEAQFDQRLFNKSRGMDSGFDGGDDEGYNVYDKPWRSETQVG
SSIYRPTKDKDKEMYGDDDIDKLIKSNRFVPDKGFKGADPSQSREGPVQFEKDEDLFGLN
KFMEQAKQARKRPTEASSSKSSHDKNKRKRE

Nucleotide sequence

Length: 1,536

>Phfumi.CG.MTP2014.S8786.g08190.04.t
GACCAGTTGGATCCGATCCAACCCACTTCCAAAGCTGTGATTTCTATGAGGTATGAGCCA
CCTCCATATGGACACAGAAAGGGTTTTATTCCACGAGCGGAGCGTGATTTTGGCGATGGC
GGGGCTTTTCCTGAAATTCCAGTTGTTCAGTTTCCTCTGGCAATGGGAAAAACAAAGAAG
AAGAAAGAGGCACTTGCTGTACAACTGGATTCTGAAGGAAAGATTCGTTATGATGCAATT
GCTCGTCAAGGTCACAGCAAGGACAGAGTGGTACACAGTAAATTTCAACAACTTGTCCCA
AAAGAAATTTTGGATGAGGATGATCCTGATCTTCAGCGACCTGATGAGGATGCAATCAGA
GAGCAAACTGAATCAACTCGACAAGCTTTGGAGAAACTCACAAATGAGAAAATTACAGCT
GCTATGCCAGTCAAGAGAGCAGAGCAACGTGCCCCTGCACAATACATCAGATACACCCCC
TCCCAACAAGGAGTGGCATTCAACTCTGGTGCCAAACAGAGAGTAATTCGCATGGTTGAA
ATGCAGAAAGATCCGATGGAACCTCCCAAATTCAAGACAAACAAAAAGTTGCCGCAAGGG
CCACCCAGCCCCCCAGCACCAGTAATGCATTCGCCCAATCGCAAGTTATCTGTAAAAGAA
CAGCAGGATTGGAAAGTTCCTCCCTGCATTTCAAACTGGAAGAATGCAAAGGGTCACACA
ATACCACTGGATAAACGTCTTGCAGCAGACGGTCGTGGATTACAGAGTGTCCATATCAAT
GAAAACTTTGCCAAGTTAGCTGAGGCATTGTACATAGCAGATAGGAAGGCCAGAGAGGCT
GTGGAAATGAGAGCTCAAGTTGAAAGGAAAGTCGCATCTAAGGAGAAAGAAGCCAAGGAA
CGGCAACTTCGACAACTTGCTGAAGAGGCCAGGAATAAACGTGCTGGAATCAAGAAGGAT
GATAGAGATGACAAAGAGGTGAAGGAAAGAGATGAAATAAGACATGATCGACACCGGGAT
CGACAAAGAGAAAGAAATCTTGCACGAGCTGCTCCTGAGAAAAGGAATCGTCTTCGTGAA
GAGCGAGATATCAGCGAGAAGATTGCACTTGGATTACCAAACACCAGAACTGCTCAGGAG
GCACAGTTTGATCAAAGACTTTTCAACAAAAGCAGGGGAATGGACAGCGGTTTCGATGGT
GGTGACGACGAGGGCTACAATGTTTATGACAAACCATGGAGATCTGAAACACAGGTTGGG
AGCAGCATTTATCGGCCAACAAAAGATAAAGACAAGGAGATGTATGGGGATGATGACATT
GACAAACTCATCAAGAGCAACAGGTTTGTTCCCGACAAAGGTTTCAAAGGTGCAGATCCG
TCACAAAGTAGAGAAGGCCCTGTCCAGTTTGAAAAGGATGAGGATCTGTTCGGTTTGAAC
AAATTCATGGAACAGGCGAAGCAGGCCCGCAAGCGACCGACCGAGGCATCGTCCAGCAAA
TCATCACACGACAAGAACAAGCGAAAAAGGGAGTGA

InterProScan

PANTHER
SKI-int_prot_SKIP (IPR017862) - T[9-501] 7.3E-229
Pfam
SKI-int_prot_SKIP_SNW-dom (IPR004015) - T[154-314] 1.0E-71

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SNW1_HUMAN 69.428 % 679 0