Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S8786.g08190.03.t

Possible name(s)

SNW1

Gene model

Phfumi.CG.MTP2014.S8786.g08190

Location

S8786 [1,057 / 7,376]

Sequences

Amino acid sequence

Length: 519

>Phfumi.CG.MTP2014.S8786.g08190.03.p
PEPTQVTYDQLDPIQPTSKAVISMRYEPPPYGHRKGFIPRAERDFGDGGAFPEIPVVQFP
LAMGKTKKKKEALAVQLDSEGKIRYDAIARQGHSKDRVVHSKFQQLVPKEILDEDDPDLQ
RPDEDAIREQTESTRQALEKLTNEKITAAMPVKRAEQRAPAQYIRYTPSQQGVAFNSGAK
QRVIRMVEMQKDPMEPPKFKTNKKLPQGPPSPPAPVMHSPNRKLSVKEQQDWKVPPCISN
WKNAKGHTIPLDKRLAADGRGLQSVHINENFAKLAEALYIADRKAREAVEMRAQVERKVA
SKEKEAKERQLRQLAEEARNKRAGIKKDDRDDKEVKERDEIRHDRHRDRQRERNLARAAP
EKRNRLREERDISEKIALGLPNTRTAQEAQFDQRLFNKSRGMDSGFDGGDDEGYNVYDKP
WRSETQVGSSIYRPTKDKDKEMYGDDDIDKLIKSNRFVPDKGFKGADPSQSREGPVQFEK
DEDLFGLNKFMEQAKQARKRPTEASSSKSSHDKNKRKRE

Nucleotide sequence

Length: 1,560

>Phfumi.CG.MTP2014.S8786.g08190.03.t
CCAGAACCTACGCAGGTTACTTATGACCAGTTGGATCCGATCCAACCCACTTCCAAAGCT
GTGATTTCTATGAGGTATGAGCCACCTCCATATGGACACAGAAAGGGTTTTATTCCACGA
GCGGAGCGTGATTTTGGCGATGGCGGGGCTTTTCCTGAAATTCCAGTTGTTCAGTTTCCT
CTGGCAATGGGAAAAACAAAGAAGAAGAAAGAGGCACTTGCTGTACAACTGGATTCTGAA
GGAAAGATTCGTTATGATGCAATTGCTCGTCAAGGTCACAGCAAGGACAGAGTGGTACAC
AGTAAATTTCAACAACTTGTCCCAAAAGAAATTTTGGATGAGGATGATCCTGATCTTCAG
CGACCTGATGAGGATGCAATCAGAGAGCAAACTGAATCAACTCGACAAGCTTTGGAGAAA
CTCACAAATGAGAAAATTACAGCTGCTATGCCAGTCAAGAGAGCAGAGCAACGTGCCCCT
GCACAATACATCAGATACACCCCCTCCCAACAAGGAGTGGCATTCAACTCTGGTGCCAAA
CAGAGAGTAATTCGCATGGTTGAAATGCAGAAAGATCCGATGGAACCTCCCAAATTCAAG
ACAAACAAAAAGTTGCCGCAAGGGCCACCCAGCCCCCCAGCACCAGTAATGCATTCGCCC
AATCGCAAGTTATCTGTAAAAGAACAGCAGGATTGGAAAGTTCCTCCCTGCATTTCAAAC
TGGAAGAATGCAAAGGGTCACACAATACCACTGGATAAACGTCTTGCAGCAGACGGTCGT
GGATTACAGAGTGTCCATATCAATGAAAACTTTGCCAAGTTAGCTGAGGCATTGTACATA
GCAGATAGGAAGGCCAGAGAGGCTGTGGAAATGAGAGCTCAAGTTGAAAGGAAAGTCGCA
TCTAAGGAGAAAGAAGCCAAGGAACGGCAACTTCGACAACTTGCTGAAGAGGCCAGGAAT
AAACGTGCTGGAATCAAGAAGGATGATAGAGATGACAAAGAGGTGAAGGAAAGAGATGAA
ATAAGACATGATCGACACCGGGATCGACAAAGAGAAAGAAATCTTGCACGAGCTGCTCCT
GAGAAAAGGAATCGTCTTCGTGAAGAGCGAGATATCAGCGAGAAGATTGCACTTGGATTA
CCAAACACCAGAACTGCTCAGGAGGCACAGTTTGATCAAAGACTTTTCAACAAAAGCAGG
GGAATGGACAGCGGTTTCGATGGTGGTGACGACGAGGGCTACAATGTTTATGACAAACCA
TGGAGATCTGAAACACAGGTTGGGAGCAGCATTTATCGGCCAACAAAAGATAAAGACAAG
GAGATGTATGGGGATGATGACATTGACAAACTCATCAAGAGCAACAGGTTTGTTCCCGAC
AAAGGTTTCAAAGGTGCAGATCCGTCACAAAGTAGAGAAGGCCCTGTCCAGTTTGAAAAG
GATGAGGATCTGTTCGGTTTGAACAAATTCATGGAACAGGCGAAGCAGGCCCGCAAGCGA
CCGACCGAGGCATCGTCCAGCAAATCATCACACGACAAGAACAAGCGAAAAAGGGAGTGA

InterProScan

PANTHER	SKI-int_prot_SKIP (IPR017862) - T[1-509] 3.1E-229
Pfam	SKI-int_prot_SKIP_SNW-dom (IPR004015) - T[162-322] 1.0E-71

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SNW1_HUMAN	67.481 %	686	0