Aniseed - Transcript Card

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S8786.g08190.01.t

Possible name(s)

SNW1

Gene model

Phfumi.CG.MTP2014.S8786.g08190

Location

S8786 [631 / 7,376]

Sequences

Amino acid sequence

Length: 530

>Phfumi.CG.MTP2014.S8786.g08190.01.p
KRNMATLSSLLPEPTQVTYDQLDPIQPTSKAVISMRYEPPPYGHRKGFIPRAERDFGDGG
AFPEIPVVQFPLAMGKTKKKKEALAVQLDSEGKIRYDAIARQGHSKDRVVHSKFQQLVPK
EILDEDDPDLQRPDEDAIREQTESTRQALEKLTNEKITAAMPVKRAEQRAPAQYIRYTPS
QQGVAFNSGAKQRVIRMVEMQKDPMEPPKFKTNKKLPQGPPSPPAPVMHSPNRKLSVKEQ
QDWKVPPCISNWKNAKGHTIPLDKRLAADGRGLQSVHINENFAKLAEALYIADRKAREAV
EMRAQVERKVASKEKEAKERQLRQLAEEARNKRAGIKKDDRDDKEVKERDEIRHDRHRDR
QRERNLARAAPEKRNRLREERDISEKIALGLPNTRTAQEAQFDQRLFNKSRGMDSGFDGG
DDEGYNVYDKPWRSETQVGSSIYRPTKDKDKEMYGDDDIDKLIKSNRFVPDKGFKGADPS
QSREGPVQFEKDEDLFGLNKFMEQAKQARKRPTEASSSKSSHDKNKRKRE

Nucleotide sequence

Length: 1,593

>Phfumi.CG.MTP2014.S8786.g08190.01.t
AAAAGGAACATGGCTACTTTGTCCAGTTTGTTGCCAGAACCTACGCAGGTTACTTATGAC
CAGTTGGATCCGATCCAACCCACTTCCAAAGCTGTGATTTCTATGAGGTATGAGCCACCT
CCATATGGACACAGAAAGGGTTTTATTCCACGAGCGGAGCGTGATTTTGGCGATGGCGGG
GCTTTTCCTGAAATTCCAGTTGTTCAGTTTCCTCTGGCAATGGGAAAAACAAAGAAGAAG
AAAGAGGCACTTGCTGTACAACTGGATTCTGAAGGAAAGATTCGTTATGATGCAATTGCT
CGTCAAGGTCACAGCAAGGACAGAGTGGTACACAGTAAATTTCAACAACTTGTCCCAAAA
GAAATTTTGGATGAGGATGATCCTGATCTTCAGCGACCTGATGAGGATGCAATCAGAGAG
CAAACTGAATCAACTCGACAAGCTTTGGAGAAACTCACAAATGAGAAAATTACAGCTGCT
ATGCCAGTCAAGAGAGCAGAGCAACGTGCCCCTGCACAATACATCAGATACACCCCCTCC
CAACAAGGAGTGGCATTCAACTCTGGTGCCAAACAGAGAGTAATTCGCATGGTTGAAATG
CAGAAAGATCCGATGGAACCTCCCAAATTCAAGACAAACAAAAAGTTGCCGCAAGGGCCA
CCCAGCCCCCCAGCACCAGTAATGCATTCGCCCAATCGCAAGTTATCTGTAAAAGAACAG
CAGGATTGGAAAGTTCCTCCCTGCATTTCAAACTGGAAGAATGCAAAGGGTCACACAATA
CCACTGGATAAACGTCTTGCAGCAGACGGTCGTGGATTACAGAGTGTCCATATCAATGAA
AACTTTGCCAAGTTAGCTGAGGCATTGTACATAGCAGATAGGAAGGCCAGAGAGGCTGTG
GAAATGAGAGCTCAAGTTGAAAGGAAAGTCGCATCTAAGGAGAAAGAAGCCAAGGAACGG
CAACTTCGACAACTTGCTGAAGAGGCCAGGAATAAACGTGCTGGAATCAAGAAGGATGAT
AGAGATGACAAAGAGGTGAAGGAAAGAGATGAAATAAGACATGATCGACACCGGGATCGA
CAAAGAGAAAGAAATCTTGCACGAGCTGCTCCTGAGAAAAGGAATCGTCTTCGTGAAGAG
CGAGATATCAGCGAGAAGATTGCACTTGGATTACCAAACACCAGAACTGCTCAGGAGGCA
CAGTTTGATCAAAGACTTTTCAACAAAAGCAGGGGAATGGACAGCGGTTTCGATGGTGGT
GACGACGAGGGCTACAATGTTTATGACAAACCATGGAGATCTGAAACACAGGTTGGGAGC
AGCATTTATCGGCCAACAAAAGATAAAGACAAGGAGATGTATGGGGATGATGACATTGAC
AAACTCATCAAGAGCAACAGGTTTGTTCCCGACAAAGGTTTCAAAGGTGCAGATCCGTCA
CAAAGTAGAGAAGGCCCTGTCCAGTTTGAAAAGGATGAGGATCTGTTCGGTTTGAACAAA
TTCATGGAACAGGCGAAGCAGGCCCGCAAGCGACCGACCGAGGCATCGTCCAGCAAATCA
TCACACGACAAGAACAAGCGAAAAAGGGAGTGA

InterProScan

PANTHER	SKI-int_prot_SKIP (IPR017862) - T[4-520] 1.6E-232
Pfam	SKI-int_prot_SKIP_SNW-dom (IPR004015) - T[173-333] 1.1E-71

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SNW1_HUMAN	67.286 %	693	0