- Transcript 'Phfumi.CG.MTP2014.S8...'
Transcript Model
Transcript Id
Phfumi.CG.MTP2014.S835.g02831.01.t
Possible name(s)
SMTN; SMTNL1; SMTNL2
Gene model
Location
S835 [13,187 / 22,438]
Amino acid sequence
Length: 637
>Phfumi.CG.MTP2014.S835.g02831.01.p
MSDHNFDRAMSLDESSLESALQRRRNSNRISYVAKHDTIPEEGCLGNENLNRSRTCLLLR
VGSNDSVEEVATPEDDFSFKGTQDGVILESPRIRALKTAGRFISRRGSLDSIPLQRRPPN
PRKLLSRCSSADSLLDRGLRLLEDTLNEDTPSPSSSPGSVKNKNFVSRYNSSPSGHSTDT
IEEEDENPCISPEQSPSSHPYEKTPSSHSPRLVSADEIGPLSDEEDSVNETLPSGSCEYL
RRFDARQLRMRNEISSLQRDVANLEALLERVIRHTGFKVSGPAEPAEKPETMRYSIDNLA
DITEEEVLEKLLDEANEYEERRLIRSALRELRKKKREAGVDTSKQRSTGRYHSSVATNGR
HTPKTDVKDSSRPSSGLHRRVGAPLGDSKANRTTTPKSLAEKYSLNSSKSTTKKDMSTGN
KKVGSIFDRGDDEVPKKSGSKLDLERRQAERRRDLQRNRSMPATTTKDARKMFAKMDVAT
SGDSKVKKVGRSPTFVVPNANNVKQMLLKWCQSKTRGYEHVDINNFSGSWANGMAFCALV
HNFFPQAFEYSELDPKNRAHNFDLAFNTAQEYADADPLLDVEDMMIMGNRPDSKCVFTYV
QSLYNKLRKFEKPLKPLSPTVKVMPGIVEVDSNAPPK
Nucleotide sequence
Length: 1,911
>Phfumi.CG.MTP2014.S835.g02831.01.t
ATGTCCGATCACAACTTCGACCGGGCAATGAGCCTCGACGAAAGTTCGCTCGAGAGCGCC
CTCCAGCGTCGACGCAACAGCAACCGCATCTCGTACGTCGCAAAACACGACACCATTCCG
GAGGAGGGTTGCCTTGGTAACGAGAACCTTAACCGCTCCCGCACTTGCCTCCTGCTCCGT
GTGGGTTCGAATGACTCCGTTGAAGAAGTTGCAACCCCAGAAGACGATTTCTCCTTCAAG
GGCACGCAGGATGGAGTAATCCTTGAGAGTCCAAGGATCAGAGCTCTAAAGACCGCCGGG
AGGTTTATTTCCAGACGCGGAAGCTTGGACTCGATTCCTCTGCAGCGCCGGCCACCTAAC
CCCAGAAAACTTTTGTCAAGATGCTCCAGCGCTGATTCTTTGTTGGATCGTGGACTTCGG
CTTCTTGAAGATACGTTAAACGAGGATACTCCTTCTCCTTCATCTTCGCCCGGCAGTGTT
AAAAACAAAAACTTTGTGTCTCGATATAACTCGTCTCCATCCGGGCACAGCACTGATACC
ATTGAAGAAGAAGACGAAAATCCTTGCATATCTCCTGAACAATCTCCGTCTTCTCATCCA
TATGAAAAAACTCCGTCATCTCATTCCCCTCGTCTCGTTTCGGCAGATGAAATTGGTCCT
TTGTCCGACGAGGAGGATTCTGTCAACGAAACTTTACCTTCCGGATCTTGCGAATATCTT
CGCAGATTTGACGCGCGTCAACTACGCATGCGCAACGAAATCTCATCGCTTCAACGTGAC
GTGGCCAACCTAGAAGCGTTGTTGGAACGCGTGATCCGTCACACTGGTTTTAAAGTTTCC
GGACCTGCTGAGCCTGCTGAAAAACCTGAAACCATGAGATACTCGATTGATAATTTGGCT
GATATCACCGAAGAGGAAGTCTTAGAAAAACTGCTCGACGAAGCCAATGAATATGAGGAA
CGAAGATTAATTCGATCTGCTCTGCGCGAGTTGCGCAAAAAGAAAAGAGAAGCGGGGGTG
GATACGTCAAAACAAAGGAGCACTGGAAGATATCATTCTTCTGTTGCCACTAACGGGCGT
CATACACCGAAAACTGATGTCAAGGACTCTTCACGTCCCTCTAGTGGACTACATAGAAGA
GTTGGAGCGCCACTTGGTGACAGTAAGGCGAACAGAACGACCACACCAAAATCATTGGCT
GAAAAGTATTCGTTGAATTCGAGTAAGTCTACCACCAAGAAAGACATGTCGACTGGAAAT
AAAAAGGTGGGAAGCATCTTTGACCGTGGAGACGATGAAGTTCCCAAAAAATCCGGAAGC
AAATTGGACCTCGAGCGACGCCAGGCGGAAAGAAGGCGCGATCTTCAGCGCAACCGATCA
ATGCCGGCCACTACTACCAAAGATGCACGGAAGATGTTCGCAAAGATGGACGTGGCTACA
TCTGGAGATTCCAAGGTGAAGAAAGTCGGCCGCAGCCCGACGTTTGTCGTTCCGAACGCA
AACAACGTGAAACAGATGCTGCTTAAGTGGTGCCAATCCAAAACACGAGGTTACGAGCAT
GTAGACATCAACAACTTCTCAGGAAGTTGGGCAAACGGGATGGCCTTCTGTGCTCTAGTG
CACAACTTCTTTCCGCAAGCCTTCGAATACAGTGAACTGGACCCGAAGAATCGCGCACAC
AACTTCGACCTGGCTTTCAACACGGCGCAGGAGTACGCCGACGCCGATCCACTGTTAGAC
GTCGAGGACATGATGATCATGGGCAACAGACCCGACAGCAAGTGCGTGTTCACGTACGTG
CAGTCGCTTTACAACAAGCTCCGAAAATTCGAGAAACCTCTCAAGCCGCTCTCGCCCACC
GTAAAGGTGATGCCCGGTATCGTCGAGGTCGACTCGAACGCGCCCCCCAAA
| Pfam |
SMTN (IPR022189) - T[295-335] 6.0E-15 |
| SUPERFAMILY |
CH_dom_sf (IPR036872) - T[494-609] 1.96E-32 |
| Gene3D |
CH_dom_sf (IPR036872) - T[499-613] 1.6E-36 |
| ProSiteProfiles |
CH-domain (IPR001715) - T[501-608] 22.297 |
| SMART |
CH-domain (IPR001715) - T[503-603] 2.2E-20 |
| Pfam |
CH-domain (IPR001715) - T[503-608] 2.7E-19 |
| CDD |
CH-domain (IPR001715) - T[504-608] 2.30862E-24 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SMTN_HUMAN | 46.018 % | 288 | 3.67E-86 |
| SMTL2_HUMAN | 53.216 % | 202 | 2.5E-58 |
| SMTL1_HUMAN | 61.682 % | 161 | 3.57E-43 |
