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TRANSCRIPT CARD

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  1. Transcript 'Phfumi.CG.MTP2014.S7...'

Transcript Model

Transcript Id

Phfumi.CG.MTP2014.S7111.g07626.01.t

Possible name(s)

CACHD1; CACNA2D2; CACNA2D3

Gene model

Phfumi.CG.MTP2014.S7111.g07626

Location

S7111 [879 / 5,563]

Sequences

Amino acid sequence

Length: 253

>Phfumi.CG.MTP2014.S7111.g07626.01.p
VGSQQEIIRTDPNVLATKVQELTEQSLKYEEMQSHLDTLTYQRQPLVGEALLNAASVTKV
CELVSSSAAYNAVKLQNAFRDACVENLRNVPSLKWQYFGSEQGVTTTFPATKAKDCGSYD
NRFRPWYVQSNVPKPKQIVIVIDKSGSMQTQDSSGVSYMELARQAANTVIETLNPYDKFA
VVAFSSSTSVYSNYKIPNGGCFSNNFAQATPQNKKLVKDYVSGISASGGTAFGIALNAAF
TFFDNVPNTTLGK

Nucleotide sequence

Length: 759

>Phfumi.CG.MTP2014.S7111.g07626.01.t
GTCGGGTCACAGCAGGAGATAATCAGGACGGACCCAAACGTTTTGGCGACCAAAGTTCAA
GAATTGACAGAACAGTCTTTGAAGTATGAAGAGATGCAGAGTCATTTGGACACATTAACC
TATCAACGACAGCCCTTGGTCGGAGAAGCTCTTCTAAATGCGGCCTCTGTCACCAAAGTT
TGTGAGCTCGTATCATCGAGCGCTGCATACAACGCGGTTAAACTGCAGAATGCCTTCAGA
GATGCTTGTGTTGAAAACTTGCGAAATGTTCCATCCCTCAAGTGGCAATATTTCGGCAGC
GAGCAAGGAGTGACTACCACGTTTCCAGCCACGAAAGCCAAGGACTGCGGTTCCTATGAC
AACAGATTTAGGCCGTGGTACGTCCAAAGTAACGTGCCAAAGCCCAAGCAGATCGTAATC
GTGATCGACAAAAGCGGCTCTATGCAGACGCAAGATAGCTCCGGTGTGAGCTATATGGAA
TTGGCAAGACAAGCTGCCAACACTGTAATTGAAACTCTTAACCCCTATGATAAGTTTGCT
GTGGTGGCTTTTTCCTCTTCAACCAGTGTCTACAGCAACTATAAAATTCCAAATGGCGGA
TGTTTCAGCAATAATTTTGCTCAGGCCACGCCACAAAACAAGAAGTTGGTCAAGGATTAC
GTCAGTGGCATCAGCGCGAGCGGTGGAACGGCGTTTGGAATCGCTTTGAATGCAGCGTTT
ACGTTTTTCGACAACGTTCCAAACACCACACTTGGTAAG

InterProScan

Pfam
VWA_N (IPR013608) - T[70-112] 7.0E-9
SUPERFAMILY
vWFA_dom_sf (IPR036465) - T[107-245] 3.4E-16
Gene3D
vWFA_dom_sf (IPR036465) - T[135-251] 6.0E-21
ProSiteProfiles
VWF_A (IPR002035) - T[137-253] 9.795
Pfam
VWF_A (IPR002035) - T[138-246] 8.9E-11

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CAHD1_HUMAN 27.551 % 94 8.13E-22
CA2D3_HUMAN 30.159 % 89.4 3.65E-20
CA2D2_HUMAN 33.333 % 90.5 1.5E-20